RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 C1orf194Q5T5A4 169 aa12.01□□□□□ -0.49
AP000550.1-201ENST00000420508 RFNGQ9Y644 331 aa12.01□□□□□ -0.49
AP000550.1-201ENST00000420508 A0A1W2PPI3 338 aa12□□□□□ -0.49
AP000550.1-201ENST00000420508 IGHV3-23P01764 117 aa12□□□□□ -0.49
AP000550.1-201ENST00000420508 TFPI2P48307 235 aa12□□□□□ -0.49
AP000550.1-201ENST00000420508 LYPD2Q6UXB3 125 aa12□□□□□ -0.49
AP000550.1-201ENST00000420508 THAP8Q8NA92 274 aa12□□□□□ -0.49
AP000550.1-201ENST00000420508 OR4X2Q8NGF9 303 aa12□□□□□ -0.49
AP000550.1-201ENST00000420508 ZNF502Q8TBZ5 544 aa12□□□□□ -0.49
AP000550.1-201ENST00000420508 C11orf53Q8IXP5 236 aa12□□□□□ -0.49
AP000550.1-201ENST00000420508 COX6CP09669 75 aa12□□□□□ -0.49
AP000550.1-201ENST00000420508 LGALS3P17931 250 aaKnown RBP12□□□□□ -0.49
AP000550.1-201ENST00000420508 GATA3P23771 443 aa12□□□□□ -0.49
AP000550.1-201ENST00000420508 LOXP28300 417 aaPredicted RBP12□□□□□ -0.49
AP000550.1-201ENST00000420508 DERL1Q9BUN8 251 aa12□□□□□ -0.49
AP000550.1-201ENST00000420508 ZNF207O43670 478 aaKnown RBP12□□□□□ -0.49
AP000550.1-201ENST00000420508 TCTAP57738 103 aa12□□□□□ -0.49
AP000550.1-201ENST00000420508 TMEM75Q8N9X5 138 aa12□□□□□ -0.49
AP000550.1-201ENST00000420508 CRIM1Q9NZV1 1036 aa12□□□□□ -0.49
AP000550.1-201ENST00000420508 ZNF726P1Q15940 193 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 LEMD1Q68G75 181 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 SIGLEC15Q6ZMC9 328 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 DMRTA2Q96SC8 542 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 NPFFO15130 113 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 CIDEAO60543 219 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 UBE2E1P51965 193 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 NIT1Q86X76 327 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 HIST1H4GQ99525 98 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 SCRT1Q9BWW7 348 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 TCF21O43680 179 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 LHBP01229 141 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 ZNF56Q15929 161 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 C1orf122Q6ZSJ8 110 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 NUP210LQ5VU65 1888 aa11.99□□□□□ -0.49
AP000550.1-201ENST00000420508 PMS2P5A8MQ11 134 aa11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 B4DSR2 109 aa11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 SLC25A16P16260 332 aa11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 CMC4P56277 68 aaPredicted RBP11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 SRSF1Q07955 248 aaKnown RBP eCLIP11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 C15orf32Q32M92 178 aa11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 HAPLN4Q86UW8 402 aa11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 FAM110DQ8TAY7 271 aaPredicted RBP11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 RAB37Q96AX2 223 aa11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 LINC00477Q96M19 166 aa11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 Q86TA4 180 aa11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 IGHV3-35A0A0C4DH35 117 aa11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 SMIM13P0DJ93 91 aa11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 COL8A2P25067 703 aa11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 RPL24P83731 157 aaKnown RBP11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 S4R3C0 116 aa11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 HEATR1Q9H583 2144 aaKnown RBP11.98□□□□□ -0.49
AP000550.1-201ENST00000420508 RRN3P1Q2M238 152 aa11.97□□□□□ -0.49
AP000550.1-201ENST00000420508 TTC9CQ8N5M4 171 aa11.97□□□□□ -0.49
AP000550.1-201ENST00000420508 NUP35Q8NFH5 326 aa11.97□□□□□ -0.49
AP000550.1-201ENST00000420508 C7orf71A4D174 169 aa11.97□□□□□ -0.49
AP000550.1-201ENST00000420508 NPIPB5A8MRT5 1133 aa11.97□□□□□ -0.49
AP000550.1-201ENST00000420508 CIRBPQ14011 172 aaKnown RBP11.97□□□□□ -0.49
AP000550.1-201ENST00000420508 SCGB3A1Q96QR1 104 aa11.97□□□□□ -0.49
AP000550.1-201ENST00000420508 FGF23Q9GZV9 251 aaPredicted RBP11.97□□□□□ -0.49
AP000550.1-201ENST00000420508 HTN1P15515 57 aa11.97□□□□□ -0.49
AP000550.1-201ENST00000420508 FAM19A2Q8N3H0 131 aa11.97□□□□□ -0.49
AP000550.1-201ENST00000420508 TRGV11A0A075B6L2 103 aa11.97□□□□□ -0.49
AP000550.1-201ENST00000420508 ZNF138P52744 262 aa11.97□□□□□ -0.49
AP000550.1-201ENST00000420508 COTL1Q14019 142 aa11.97□□□□□ -0.49
AP000550.1-201ENST00000420508 FER1L5A0AVI2 2057 aa11.97□□□□□ -0.49
AP000550.1-201ENST00000420508 PRR20EP86478 221 aa11.96□□□□□ -0.49
AP000550.1-201ENST00000420508 PRR20CP86479 221 aa11.96□□□□□ -0.49
AP000550.1-201ENST00000420508 PRR20DP86480 221 aa11.96□□□□□ -0.49
AP000550.1-201ENST00000420508 PRR20BP86481 221 aa11.96□□□□□ -0.49
AP000550.1-201ENST00000420508 PRR20AP86496 221 aa11.96□□□□□ -0.49
AP000550.1-201ENST00000420508 SLC25A2Q9BXI2 301 aa11.96□□□□□ -0.49
AP000550.1-201ENST00000420508 IGHV3OR16-10A0A075B7F0 116 aa11.96□□□□□ -0.49
AP000550.1-201ENST00000420508 A0A1B0GV90 55 aa11.95□□□□□ -0.5
AP000550.1-201ENST00000420508 M0R381 172 aa11.95□□□□□ -0.5
AP000550.1-201ENST00000420508 IGHV2-5P01817 119 aa11.95□□□□□ -0.5
AP000550.1-201ENST00000420508 ATOH7Q8N100 152 aa11.95□□□□□ -0.5
AP000550.1-201ENST00000420508 UBE2L6O14933 153 aa11.95□□□□□ -0.5
AP000550.1-201ENST00000420508 C19orf54Q5BKX5 351 aa11.95□□□□□ -0.5
AP000550.1-201ENST00000420508 RPRMLQ8N4K4 120 aa11.95□□□□□ -0.5
AP000550.1-201ENST00000420508 SSBP4Q9BWG4 385 aaPredicted RBP11.95□□□□□ -0.5
AP000550.1-201ENST00000420508 AMMECR1LQ6DCA0 310 aa11.95□□□□□ -0.5
AP000550.1-201ENST00000420508 RTTNQ86VV8 2226 aa11.95□□□□□ -0.5
AP000550.1-201ENST00000420508 FAM181BA6NEQ2 426 aa11.94□□□□□ -0.5
AP000550.1-201ENST00000420508 TGFAP01135 160 aa11.94□□□□□ -0.5
AP000550.1-201ENST00000420508 PYY3Q5JQD4 70 aa11.94□□□□□ -0.5
AP000550.1-201ENST00000420508 OR9G4Q8NGQ1 327 aa11.94□□□□□ -0.5
AP000550.1-201ENST00000420508 PRO3102Q9H379 93 aa11.94□□□□□ -0.5
AP000550.1-201ENST00000420508 LINC00205P59089 165 aa11.94□□□□□ -0.5
AP000550.1-201ENST00000420508 DMRTA1Q5VZB9 504 aa11.94□□□□□ -0.5
AP000550.1-201ENST00000420508 TRAV40A0A0B4J280 105 aa11.94□□□□□ -0.5
AP000550.1-201ENST00000420508 GFI1BQ5VTD9 330 aa11.94□□□□□ -0.5
AP000550.1-201ENST00000420508 JMJD8Q96S16 334 aa11.94□□□□□ -0.5
AP000550.1-201ENST00000420508 FOXC2Q99958 501 aa11.94□□□□□ -0.5
AP000550.1-201ENST00000420508 TNFRSF18Q9Y5U5 241 aa11.94□□□□□ -0.5
AP000550.1-201ENST00000420508 ZNF407Q9C0G0 2248 aa11.94□□□□□ -0.5
AP000550.1-201ENST00000420508 IGHV3OR16-13A0A075B7E8 117 aa11.93□□□□□ -0.5
AP000550.1-201ENST00000420508 IGHV3-74A0A0B4J1X5 117 aa11.93□□□□□ -0.5
AP000550.1-201ENST00000420508 INS-IGF2F8WCM5 200 aa11.93□□□□□ -0.5
AP000550.1-201ENST00000420508 DPM2O94777 84 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms