RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 EP400Q96L91 3159 aa8.71□□□□□ -1.01
COL12A1-203ENST00000416123 MGST2Q99735 147 aa8.71□□□□□ -1.01
COL12A1-203ENST00000416123 VGLL1Q99990 258 aa8.71□□□□□ -1.01
COL12A1-203ENST00000416123 SLC50A1Q9BRV3 221 aa8.71□□□□□ -1.01
COL12A1-203ENST00000416123 OR11H12B2RN74 326 aa8.71□□□□□ -1.01
COL12A1-203ENST00000416123 H0YJW9 148 aa8.71□□□□□ -1.01
COL12A1-203ENST00000416123 OR11H1Q8NG94 326 aa8.71□□□□□ -1.01
COL12A1-203ENST00000416123 OR11H2Q8NH07 326 aa8.71□□□□□ -1.01
COL12A1-203ENST00000416123 COQ2Q96H96 371 aa8.71□□□□□ -1.01
COL12A1-203ENST00000416123 MRPS16Q9Y3D3 137 aaKnown RBP8.71□□□□□ -1.01
COL12A1-203ENST00000416123 C21orf62-AS1Q17RA5 79 aa8.71□□□□□ -1.01
COL12A1-203ENST00000416123 NOTCH3Q9UM47 2321 aa8.71□□□□□ -1.02
COL12A1-203ENST00000416123 C19orf67A6NJJ6 358 aa8.71□□□□□ -1.02
COL12A1-203ENST00000416123 H0YIZ8 118 aa8.71□□□□□ -1.02
COL12A1-203ENST00000416123 SMIM13P0DJ93 91 aa8.71□□□□□ -1.02
COL12A1-203ENST00000416123 CDX1P47902 265 aaPredicted RBP8.71□□□□□ -1.02
COL12A1-203ENST00000416123 SRSF4Q08170 494 aaKnown RBP8.71□□□□□ -1.02
COL12A1-203ENST00000416123 SSC4DQ8WTU2 575 aa8.71□□□□□ -1.02
COL12A1-203ENST00000416123 A0A0U1RRA0 63 aa8.71□□□□□ -1.02
COL12A1-203ENST00000416123 CNTFRP26992 372 aa8.71□□□□□ -1.02
COL12A1-203ENST00000416123 TMEM183AQ8IXX5 376 aa8.71□□□□□ -1.02
COL12A1-203ENST00000416123 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.71□□□□□ -1.02
COL12A1-203ENST00000416123 H3BRM9 83 aa8.71□□□□□ -1.02
COL12A1-203ENST00000416123 VCX2Q9H322 139 aa8.71□□□□□ -1.02
COL12A1-203ENST00000416123 LINC00473A8K010 186 aa8.71□□□□□ -1.02
COL12A1-203ENST00000416123 SFTA2Q6UW10 78 aa8.71□□□□□ -1.02
COL12A1-203ENST00000416123 Q6P435 159 aa8.7□□□□□ -1.02
COL12A1-203ENST00000416123 SOX21Q9Y651 276 aaPredicted RBP8.7□□□□□ -1.02
COL12A1-203ENST00000416123 MED13Q9UHV7 2174 aa8.7□□□□□ -1.02
COL12A1-203ENST00000416123 ATP5LO75964 103 aa8.7□□□□□ -1.02
COL12A1-203ENST00000416123 DUSP14O95147 198 aaKnown RBP8.7□□□□□ -1.02
COL12A1-203ENST00000416123 LINC00469Q8N7U9 141 aa8.7□□□□□ -1.02
COL12A1-203ENST00000416123 OCC1Q8TAD7 63 aa8.7□□□□□ -1.02
COL12A1-203ENST00000416123 HOXA5P20719 270 aa8.7□□□□□ -1.02
COL12A1-203ENST00000416123 CCL20P78556 96 aa8.7□□□□□ -1.02
COL12A1-203ENST00000416123 TNFRSF14Q92956 283 aa8.7□□□□□ -1.02
COL12A1-203ENST00000416123 ATRAIDQ6UW56 229 aa8.7□□□□□ -1.02
COL12A1-203ENST00000416123 CRPP02741 224 aa8.7□□□□□ -1.02
COL12A1-203ENST00000416123 NPC2P61916 151 aa8.7□□□□□ -1.02
COL12A1-203ENST00000416123 SAMD13Q5VXD3 122 aa8.7□□□□□ -1.02
COL12A1-203ENST00000416123 TRBV7-9A0A0J9YWB2 115 aa8.7□□□□□ -1.02
COL12A1-203ENST00000416123 PGPEP1Q9NXJ5 209 aa8.7□□□□□ -1.02
COL12A1-203ENST00000416123 HGFACQ04756 655 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 LY6G6EA0A0G2JKS1 128 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 IL17RELQ6ZVW7 336 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 C3orf56Q8N813 242 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 SEPSECSQ9HD40 501 aaKnown RBP8.69□□□□□ -1.02
COL12A1-203ENST00000416123 U3KQA8 63 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 Q5PR19 223 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 TREML4Q6UXN2 200 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 SPOCK3Q9BQ16 436 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 RCHY1Q96PM5 261 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 WISP1O95388 367 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 DDTP30046 118 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 MINOS1Q5TGZ0 78 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 DMRTA1Q5VZB9 504 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 MINOS1-NBL1R4GNA1 71 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 TRBV7-1A0A0A6YYK4 115 aa8.69□□□□□ -1.02
COL12A1-203ENST00000416123 IFI27P40305 119 aaPredicted RBP8.68□□□□□ -1.02
COL12A1-203ENST00000416123 C5orf64Q2M2E5 130 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 Q8TAT8 98 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 CHCHD5Q9BSY4 110 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 GGTLC1Q9BX51 225 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 SPTAN1Q13813 2472 aaKnown RBP8.68□□□□□ -1.02
COL12A1-203ENST00000416123 FREM1Q5H8C1 2179 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 ADARB2-AS1A8MUL3 147 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 MLANAQ16655 118 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 IGKV1-16P04430 117 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 TMEM249Q2WGJ8 235 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 M0R1W7 72 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 CD28P10747 220 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 TEX38Q6PEX7 206 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 TRGV1A0A0A0MS02 117 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 TYMSP04818 313 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 SRRM4A7MD48 611 aaKnown RBP8.68□□□□□ -1.02
COL12A1-203ENST00000416123 NAPSAO96009 420 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 SIGLEC9Q9Y336 463 aa8.68□□□□□ -1.02
COL12A1-203ENST00000416123 SERF1AO75920 110 aa8.67□□□□□ -1.02
COL12A1-203ENST00000416123 HS3ST6Q96QI5 342 aa8.67□□□□□ -1.02
COL12A1-203ENST00000416123 IGHG3P01860 377 aa8.67□□□□□ -1.02
COL12A1-203ENST00000416123 SUPT4H1P63272 117 aaKnown RBP8.67□□□□□ -1.02
COL12A1-203ENST00000416123 A0A1B0GV72 72 aa8.67□□□□□ -1.02
COL12A1-203ENST00000416123 IGHV4-39P01824 125 aa8.67□□□□□ -1.02
COL12A1-203ENST00000416123 KIAA1549Q9HCM3 1950 aa8.67□□□□□ -1.02
COL12A1-203ENST00000416123 NCR2O95944 276 aa8.67□□□□□ -1.02
COL12A1-203ENST00000416123 ASCL4Q6XD76 172 aa8.67□□□□□ -1.02
COL12A1-203ENST00000416123 FBLN5Q9UBX5 448 aa8.67□□□□□ -1.02
COL12A1-203ENST00000416123 Q6AWC8 147 aa8.67□□□□□ -1.02
COL12A1-203ENST00000416123 PARD6GQ9BYG4 376 aaPredicted RBP8.67□□□□□ -1.02
COL12A1-203ENST00000416123 ID3Q02535 119 aa8.67□□□□□ -1.02
COL12A1-203ENST00000416123 FAM90A9PA6NNJ1 464 aa8.66□□□□□ -1.02
COL12A1-203ENST00000416123 IGKV1-5P01602 117 aa8.66□□□□□ -1.02
COL12A1-203ENST00000416123 SYNJ2BPP57105 145 aa8.66□□□□□ -1.02
COL12A1-203ENST00000416123 TRGV11A0A075B6L2 103 aa8.66□□□□□ -1.02
COL12A1-203ENST00000416123 DUX4L9Q6RFH8 374 aaPredicted RBP8.66□□□□□ -1.02
COL12A1-203ENST00000416123 A6NNC1 897 aa8.66□□□□□ -1.02
COL12A1-203ENST00000416123 SRSF1Q07955 248 aaKnown RBP eCLIP8.66□□□□□ -1.02
COL12A1-203ENST00000416123 TNRC6AQ8NDV7 1962 aaKnown RBP8.66□□□□□ -1.02
COL12A1-203ENST00000416123 ERCC8Q13216 396 aa8.66□□□□□ -1.02
COL12A1-203ENST00000416123 DERL1Q9BUN8 251 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms