RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 TMEM167AQ8TBQ9 72 aa11.46□□□□□ -0.57
SGCE-202ENST00000415788 TMEM140Q9NV12 185 aa11.46□□□□□ -0.57
SGCE-202ENST00000415788 G6PCP35575 357 aa11.46□□□□□ -0.58
SGCE-202ENST00000415788 RPL29P47914 159 aaKnown RBP11.46□□□□□ -0.58
SGCE-202ENST00000415788 GNB1P62873 340 aa11.46□□□□□ -0.58
SGCE-202ENST00000415788 PRSS8Q16651 343 aa11.46□□□□□ -0.58
SGCE-202ENST00000415788 TMEM183BQ1AE95 376 aa11.46□□□□□ -0.58
SGCE-202ENST00000415788 ZNF705AQ6ZN79 300 aaPredicted RBP11.46□□□□□ -0.58
SGCE-202ENST00000415788 MMD2Q8IY49 270 aa11.46□□□□□ -0.58
SGCE-202ENST00000415788 TMEM256Q8N2U0 113 aa11.46□□□□□ -0.58
SGCE-202ENST00000415788 DTD1Q8TEA8 209 aa11.46□□□□□ -0.58
SGCE-202ENST00000415788 SFRP2Q96HF1 295 aa11.46□□□□□ -0.58
SGCE-202ENST00000415788 TMEM208Q9BTX3 173 aa11.46□□□□□ -0.58
SGCE-202ENST00000415788 RIPPLY3P57055 190 aa11.45□□□□□ -0.58
SGCE-202ENST00000415788 ZNF562Q6V9R5 426 aa11.45□□□□□ -0.58
SGCE-202ENST00000415788 Q6ZSV7 163 aa11.45□□□□□ -0.58
SGCE-202ENST00000415788 H2BFWTQ7Z2G1 175 aa11.45□□□□□ -0.58
SGCE-202ENST00000415788 OR2T6Q8NHC8 308 aa11.45□□□□□ -0.58
SGCE-202ENST00000415788 SGMS2Q8NHU3 365 aa11.45□□□□□ -0.58
SGCE-202ENST00000415788 C16orf95Q9H693 158 aa11.45□□□□□ -0.58
SGCE-202ENST00000415788 ZNF702PQ9H963 129 aa11.45□□□□□ -0.58
SGCE-202ENST00000415788 MPDU1O75352 247 aa11.44□□□□□ -0.58
SGCE-202ENST00000415788 ACTL6BO94805 426 aa11.44□□□□□ -0.58
SGCE-202ENST00000415788 IGHG2P01859 326 aa11.44□□□□□ -0.58
SGCE-202ENST00000415788 IL6RP08887 468 aaPredicted RBP11.44□□□□□ -0.58
SGCE-202ENST00000415788 ADMP35318 185 aa11.44□□□□□ -0.58
SGCE-202ENST00000415788 SRSF2Q01130 221 aaKnown RBP11.44□□□□□ -0.58
SGCE-202ENST00000415788 TPSG1Q9NRR2 321 aa11.44□□□□□ -0.58
SGCE-202ENST00000415788 MXRA5Q9NR99 2828 aa11.44□□□□□ -0.58
SGCE-202ENST00000415788 UPK2O00526 184 aa11.44□□□□□ -0.58
SGCE-202ENST00000415788 CA2P00918 260 aa11.44□□□□□ -0.58
SGCE-202ENST00000415788 RPL8P62917 257 aaKnown RBP11.44□□□□□ -0.58
SGCE-202ENST00000415788 CX3CL1P78423 397 aa11.44□□□□□ -0.58
SGCE-202ENST00000415788 RELBQ01201 579 aa11.44□□□□□ -0.58
SGCE-202ENST00000415788 ARSJQ5FYB0 599 aaPredicted RBP11.44□□□□□ -0.58
SGCE-202ENST00000415788 CST9LP1Q5W188 147 aa11.44□□□□□ -0.58
SGCE-202ENST00000415788 OR5T1Q8NG75 326 aa11.44□□□□□ -0.58
SGCE-202ENST00000415788 ZNF430Q9H8G1 570 aaPredicted RBP11.44□□□□□ -0.58
SGCE-202ENST00000415788 WDR83OSQ9Y284 106 aa11.44□□□□□ -0.58
SGCE-202ENST00000415788 IGHV7-81A0A0B4J1V7 117 aa11.43□□□□□ -0.58
SGCE-202ENST00000415788 A0A1B0GUS0 222 aa11.43□□□□□ -0.58
SGCE-202ENST00000415788 NDUFB4O95168 129 aa11.43□□□□□ -0.58
SGCE-202ENST00000415788 TOMM20LQ6UXN7 152 aa11.43□□□□□ -0.58
SGCE-202ENST00000415788 OR10G8Q8NGN5 311 aa11.43□□□□□ -0.58
SGCE-202ENST00000415788 HSPB9Q9BQS6 159 aa11.43□□□□□ -0.58
SGCE-202ENST00000415788 ZNF580Q9UK33 172 aa11.43□□□□□ -0.58
SGCE-202ENST00000415788 PRNDQ9UKY0 176 aa11.43□□□□□ -0.58
SGCE-202ENST00000415788 TRBV9A0A0B4J1U6 114 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 A0A1W2PPV4 95 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 SH2D7A6NKC9 451 aaPredicted RBP11.42□□□□□ -0.58
SGCE-202ENST00000415788 FCN1O00602 326 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 CNIH1O95406 144 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 Q0VG73 95 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.42□□□□□ -0.58
SGCE-202ENST00000415788 LY96Q9Y6Y9 160 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 NUPR1O60356 82 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 CRISP2P16562 243 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 VDAC2P45880 294 aaPredicted RBP11.42□□□□□ -0.58
SGCE-202ENST00000415788 ATP5G3P48201 142 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 RPP30P78346 268 aaKnown RBP11.42□□□□□ -0.58
SGCE-202ENST00000415788 RPL19P84098 196 aaKnown RBP11.42□□□□□ -0.58
SGCE-202ENST00000415788 FXYD3Q14802 87 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 TNXAQ16473 311 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 MRGPRG-AS1Q2M3A8 158 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 Q6ZS46 218 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 OR4A16Q8NH70 328 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 TMEM158Q8WZ71 300 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 ARPC1AQ92747 370 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 VAMP8Q9BV40 100 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 IL36BQ9NZH7 164 aa11.42□□□□□ -0.58
SGCE-202ENST00000415788 C15orf61A6NNL5 157 aa11.41□□□□□ -0.58
SGCE-202ENST00000415788 IGF1P05019 195 aa11.41□□□□□ -0.58
SGCE-202ENST00000415788 OR9G9P0C7N8 305 aa11.41□□□□□ -0.58
SGCE-202ENST00000415788 COMPP49747 757 aaPredicted RBP11.41□□□□□ -0.58
SGCE-202ENST00000415788 Q6ZWC4 215 aa11.41□□□□□ -0.58
SGCE-202ENST00000415788 OR5AU1Q8NGC0 362 aa11.41□□□□□ -0.58
SGCE-202ENST00000415788 OR5B3Q8NH48 314 aa11.41□□□□□ -0.58
SGCE-202ENST00000415788 LINC01006Q8NI28 216 aa11.41□□□□□ -0.58
SGCE-202ENST00000415788 COMMD5Q9GZQ3 224 aa11.41□□□□□ -0.58
SGCE-202ENST00000415788 RBMXL2O75526 392 aaKnown RBP11.4□□□□□ -0.58
SGCE-202ENST00000415788 CXorf1O96002 111 aa11.4□□□□□ -0.58
SGCE-202ENST00000415788 OPRK1P41145 380 aa11.4□□□□□ -0.58
SGCE-202ENST00000415788 CRIP2P52943 208 aaPredicted RBP11.4□□□□□ -0.58
SGCE-202ENST00000415788 KRTAP24-1Q3LI83 254 aa11.4□□□□□ -0.58
SGCE-202ENST00000415788 OR4B1Q8NGF8 309 aa11.4□□□□□ -0.58
SGCE-202ENST00000415788 QTRT1Q9BXR0 403 aaKnown RBP11.4□□□□□ -0.58
SGCE-202ENST00000415788 SERTAD4Q9NUC0 356 aa11.4□□□□□ -0.58
SGCE-202ENST00000415788 TMEM14BQ9NUH8 114 aa11.4□□□□□ -0.58
SGCE-202ENST00000415788 FOXA2Q9Y261 457 aaPredicted RBP11.4□□□□□ -0.58
SGCE-202ENST00000415788 TRAV3A0A0B4J244 114 aa11.4□□□□□ -0.59
SGCE-202ENST00000415788 TMEM89A2RUT3 159 aa11.4□□□□□ -0.59
SGCE-202ENST00000415788 CLPSL1A2RUU4 121 aa11.4□□□□□ -0.59
SGCE-202ENST00000415788 ATP6V0E1O15342 81 aa11.4□□□□□ -0.59
SGCE-202ENST00000415788 STAG3L2P0CL84 134 aa11.4□□□□□ -0.59
SGCE-202ENST00000415788 STAG3L3P0CL85 134 aa11.4□□□□□ -0.59
SGCE-202ENST00000415788 SSBP2P81877 361 aaPredicted RBP11.4□□□□□ -0.59
SGCE-202ENST00000415788 ZNF90Q03938 601 aa11.4□□□□□ -0.59
SGCE-202ENST00000415788 COX19Q49B96 90 aa11.4□□□□□ -0.59
SGCE-202ENST00000415788 SRSF12Q8WXF0 261 aaKnown RBP11.4□□□□□ -0.59
SGCE-202ENST00000415788 MRPL18Q9H0U6 180 aaKnown RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms