RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 OR1B1Q8NGR6 318 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 NXT2Q9NPJ8 142 aaKnown RBP6.97□□□□□ -1.29
SYNE1-211ENST00000413186 ZNF581Q9P0T4 197 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 MSGN1A6NI15 193 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 C1QL1O75973 258 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 IGHV2-5P01817 119 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 COL8A1P27658 744 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 PUSL1Q8N0Z8 303 aaKnown RBP6.97□□□□□ -1.29
SYNE1-211ENST00000413186 DUX5Q96PT3 197 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 DCHS1Q96JQ0 3298 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 C15orf61A6NNL5 157 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 TMEM250H0YL14 139 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 RRHO14718 337 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 HYPMO75409 117 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 CD5P06127 495 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 PAFAH1B2P68402 229 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 FAM106AQ4KMX7 169 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 OR4D5Q8NGN0 318 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 RNASEH2CQ8TDP1 164 aaKnown RBP6.97□□□□□ -1.29
SYNE1-211ENST00000413186 GGTLC1Q9BX51 225 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 CFAP47Q6ZTR5 3102 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 TRAV8-4A0A0B4J246 113 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 A0A1W2PS18 150 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 DNASE2O00115 360 aaPredicted RBP6.96□□□□□ -1.29
SYNE1-211ENST00000413186 RND2P52198 227 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 SUPT4H1P63272 117 aaKnown RBP6.96□□□□□ -1.29
SYNE1-211ENST00000413186 KLRD1Q13241 179 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 TCTEX1D4Q5JR98 221 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 C10orf113Q5VZT2 155 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 IGSF23A1L1A6 192 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 SLC25A20O43772 301 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 NDUFS7O75251 213 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 APOMO95445 188 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 IGHV4-39P01824 125 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 FGF8P55075 233 aaPredicted RBP6.96□□□□□ -1.29
SYNE1-211ENST00000413186 HBBP68871 147 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 SRSF12Q8WXF0 261 aaKnown RBP6.96□□□□□ -1.29
SYNE1-211ENST00000413186 NABP2Q9BQ15 211 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 PRR14LQ5THK1 2151 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 ADAMTS20P59510 1910 aa6.96□□□□□ -1.29
SYNE1-211ENST00000413186 GHRHP01286 108 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 RUNX1Q01196 453 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 LDLRAD2Q5SZI1 272 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 CACNG8Q8WXS5 425 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 FGF23Q9GZV9 251 aaPredicted RBP6.96□□□□□ -1.3
SYNE1-211ENST00000413186 UQCR10Q9UDW1 63 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 ZNF257Q9Y2Q1 563 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 PXMP4Q9Y6I8 212 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 PLA2G2AP14555 144 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 PMVKQ15126 192 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 SPATA45Q537H7 98 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 OR10G8Q8NGN5 311 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 C10orf105Q8TEF2 133 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 ORAOV1Q8WV07 137 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 IFI27L2Q9H2X8 130 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 CST9LQ9H4G1 147 aa6.96□□□□□ -1.3
SYNE1-211ENST00000413186 PTPRBP23467 1997 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 IGHV1-69DA0A0B4J2H0 117 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 H0YIZ8 118 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 IGHV1-69P01742 117 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 TRGV3P03979 118 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 GZMBP10144 247 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 PRB3Q04118 309 aaPredicted RBP6.95□□□□□ -1.3
SYNE1-211ENST00000413186 HERPUD1Q15011 391 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 LYPD6Q86Y78 171 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 BRK1Q8WUW1 75 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 HIGD1AQ9Y241 93 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 A0A1W2PPI3 338 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 J3KRW8 73 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 PAGE4O60829 102 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 SAA4P35542 130 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 C16orf82Q7Z2V1 217 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 DYNLRB2Q8TF09 96 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 VWC2LB2RUY7 222 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 TNFRSF6BO95407 300 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 C17orf58Q2M2W7 97 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 OR4P4Q8NGL7 312 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 TMEM167AQ8TBQ9 72 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 PKIGQ9Y2B9 76 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 NAV2Q8IVL1 2488 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 IGHV3-21A0A0B4J1V1 117 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 H0YJW9 148 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 C19orf84I3L1E1 186 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 RAMP3O60896 148 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 PSG5Q15238 335 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 GUCA2BQ16661 112 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 TMEM177Q53S58 311 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 CBLN2Q8IUK8 224 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 METTL26Q96S19 204 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 MRPL32Q9BYC8 188 aaKnown RBP6.95□□□□□ -1.3
SYNE1-211ENST00000413186 BOD1L1Q8NFC6 3051 aa6.95□□□□□ -1.3
SYNE1-211ENST00000413186 IGKV1-6A0A0C4DH72 117 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 H3BUX3 64 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 EIF3GO75821 320 aaKnown RBP eCLIP6.94□□□□□ -1.3
SYNE1-211ENST00000413186 DPM2O94777 84 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 PRCDQ00LT1 54 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 MSMPQ1L6U9 139 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 RASL11AQ6T310 242 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 BRD3OSQ6XYD6 125 aa6.94□□□□□ -1.3
SYNE1-211ENST00000413186 C8orf31Q8N9H6 132 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms