RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 IGHV4-39P01824 125 aa11.25□□□□□ -0.61
MKS1-203ENST00000393120 HLA-DRB1P01911 266 aa11.25□□□□□ -0.61
MKS1-203ENST00000393120 TCRAP04437 139 aa11.25□□□□□ -0.61
MKS1-203ENST00000393120 EGR2P11161 476 aaPredicted RBP11.25□□□□□ -0.61
MKS1-203ENST00000393120 CBLN1P23435 193 aa11.25□□□□□ -0.61
MKS1-203ENST00000393120 KLF17Q5JT82 389 aaPredicted RBP11.25□□□□□ -0.61
MKS1-203ENST00000393120 MRPL18Q9H0U6 180 aaKnown RBP11.25□□□□□ -0.61
MKS1-203ENST00000393120 ZNF586Q9NXT0 402 aa11.25□□□□□ -0.61
MKS1-203ENST00000393120 GNG7O60262 68 aa11.25□□□□□ -0.61
MKS1-203ENST00000393120 BPIFA4PQ86YQ2 179 aa11.25□□□□□ -0.61
MKS1-203ENST00000393120 GBGT1Q8N5D6 347 aa11.25□□□□□ -0.61
MKS1-203ENST00000393120 TMEM18Q96B42 140 aa11.25□□□□□ -0.61
MKS1-203ENST00000393120 RNF125Q96EQ8 232 aa11.25□□□□□ -0.61
MKS1-203ENST00000393120 GRAMD2BQ96HH9 432 aa11.25□□□□□ -0.61
MKS1-203ENST00000393120 HRNRQ86YZ3 2850 aaPredicted RBP11.24□□□□□ -0.61
MKS1-203ENST00000393120 RELNP78509 3460 aa11.24□□□□□ -0.61
MKS1-203ENST00000393120 IZUMO1RA6ND01 250 aa11.24□□□□□ -0.61
MKS1-203ENST00000393120 F8W735 103 aaPredicted RBP11.24□□□□□ -0.61
MKS1-203ENST00000393120 GATCO43716 136 aaKnown RBP11.24□□□□□ -0.61
MKS1-203ENST00000393120 LTAP01374 205 aa11.24□□□□□ -0.61
MKS1-203ENST00000393120 SNRPCP09234 159 aaKnown RBP11.24□□□□□ -0.61
MKS1-203ENST00000393120 FCGR2BP31994 310 aaPredicted RBP11.24□□□□□ -0.61
MKS1-203ENST00000393120 IER3P46695 156 aa11.24□□□□□ -0.61
MKS1-203ENST00000393120 JOSD1Q15040 202 aaPredicted RBP11.24□□□□□ -0.61
MKS1-203ENST00000393120 RASL11AQ6T310 242 aa11.24□□□□□ -0.61
MKS1-203ENST00000393120 LYPD1Q8N2G4 141 aa11.24□□□□□ -0.61
MKS1-203ENST00000393120 NHLRC2Q8NBF2 726 aa11.24□□□□□ -0.61
MKS1-203ENST00000393120 NUDT10Q8NFP7 164 aa11.24□□□□□ -0.61
MKS1-203ENST00000393120 NUDT11Q96G61 164 aa11.24□□□□□ -0.61
MKS1-203ENST00000393120 TXN2Q99757 166 aa11.24□□□□□ -0.61
MKS1-203ENST00000393120 SERTAD4Q9NUC0 356 aa11.24□□□□□ -0.61
MKS1-203ENST00000393120 C21orf62Q9NYP8 219 aa11.24□□□□□ -0.61
MKS1-203ENST00000393120 CHD8Q9HCK8 2581 aa11.24□□□□□ -0.61
MKS1-203ENST00000393120 TRBV6-1A0A0K0K1D8 114 aa11.23□□□□□ -0.61
MKS1-203ENST00000393120 SAA4P35542 130 aa11.23□□□□□ -0.61
MKS1-203ENST00000393120 TRBV19A0A075B6N1 114 aa11.23□□□□□ -0.61
MKS1-203ENST00000393120 SNURFLB1AK76 121 aa11.23□□□□□ -0.61
MKS1-203ENST00000393120 NPFFO15130 113 aa11.23□□□□□ -0.61
MKS1-203ENST00000393120 IL4P05112 153 aa11.23□□□□□ -0.61
MKS1-203ENST00000393120 IGLC2P0DOY2 106 aa11.23□□□□□ -0.61
MKS1-203ENST00000393120 PAX8Q06710 450 aa11.23□□□□□ -0.61
MKS1-203ENST00000393120 FAM120AOSQ5T036 256 aa11.23□□□□□ -0.61
MKS1-203ENST00000393120 TMEM136Q6ZRR5 245 aa11.23□□□□□ -0.61
MKS1-203ENST00000393120 OR4F17Q8NGA8 305 aa11.23□□□□□ -0.61
MKS1-203ENST00000393120 OR5R1Q8NH85 324 aa11.23□□□□□ -0.61
MKS1-203ENST00000393120 WIPF2Q8TF74 440 aaPredicted RBP11.23□□□□□ -0.61
MKS1-203ENST00000393120 ZNF492Q9P255 531 aa11.23□□□□□ -0.61
MKS1-203ENST00000393120 SPTBN1Q01082 2364 aaKnown RBP11.22□□□□□ -0.61
MKS1-203ENST00000393120 MRPS12O15235 138 aaKnown RBP11.22□□□□□ -0.61
MKS1-203ENST00000393120 SCGB2A1O75556 95 aa11.22□□□□□ -0.61
MKS1-203ENST00000393120 NDUFB8O95169 186 aa11.22□□□□□ -0.61
MKS1-203ENST00000393120 AMY1AP04745 511 aa11.22□□□□□ -0.61
MKS1-203ENST00000393120 FRMD6-AS1P0C7T7 363 aa11.22□□□□□ -0.61
MKS1-203ENST00000393120 ESDP10768 282 aa11.22□□□□□ -0.61
MKS1-203ENST00000393120 Q0VG73 95 aa11.22□□□□□ -0.61
MKS1-203ENST00000393120 VN1R17PQ8TDU5 208 aa11.22□□□□□ -0.61
MKS1-203ENST00000393120 FAM168AQ92567 244 aa11.22□□□□□ -0.61
MKS1-203ENST00000393120 PRSS22Q9GZN4 317 aa11.22□□□□□ -0.61
MKS1-203ENST00000393120 NDUFS8O00217 210 aa11.21□□□□□ -0.61
MKS1-203ENST00000393120 CT83Q5H943 113 aa11.21□□□□□ -0.61
MKS1-203ENST00000393120 TSKUQ8WUA8 353 aa11.21□□□□□ -0.61
MKS1-203ENST00000393120 LRBAP50851 2863 aa11.21□□□□□ -0.61
MKS1-203ENST00000393120 CENPVL3A0A0U1RRI6 287 aa11.21□□□□□ -0.62
MKS1-203ENST00000393120 HLA-DQA1P01909 254 aa11.21□□□□□ -0.62
MKS1-203ENST00000393120 CRISP2P16562 243 aa11.21□□□□□ -0.62
MKS1-203ENST00000393120 TCL1AP56279 114 aa11.21□□□□□ -0.62
MKS1-203ENST00000393120 Q56UQ5 140 aa11.21□□□□□ -0.62
MKS1-203ENST00000393120 TMEM256Q8N2U0 113 aa11.21□□□□□ -0.62
MKS1-203ENST00000393120 PIP4P2Q8N4L2 257 aa11.21□□□□□ -0.62
MKS1-203ENST00000393120 FAM110DQ8TAY7 271 aaPredicted RBP11.21□□□□□ -0.62
MKS1-203ENST00000393120 CMTM2Q8TAZ6 248 aa11.21□□□□□ -0.62
MKS1-203ENST00000393120 PIMREGQ9BSJ6 248 aa11.21□□□□□ -0.62
MKS1-203ENST00000393120 NAT8BQ9UHF3 227 aa11.21□□□□□ -0.62
MKS1-203ENST00000393120 C19orf71A6NCJ1 209 aa11.2□□□□□ -0.62
MKS1-203ENST00000393120 VWC2LB2RUY7 222 aa11.2□□□□□ -0.62
MKS1-203ENST00000393120 H3BTX0 84 aa11.2□□□□□ -0.62
MKS1-203ENST00000393120 GZMBP10144 247 aa11.2□□□□□ -0.62
MKS1-203ENST00000393120 PDE6HQ13956 83 aa11.2□□□□□ -0.62
MKS1-203ENST00000393120 USF2Q15853 346 aaPredicted RBP11.2□□□□□ -0.62
MKS1-203ENST00000393120 CDPF1Q6NVV7 123 aa11.2□□□□□ -0.62
MKS1-203ENST00000393120 PRDM13Q9H4Q3 707 aa11.2□□□□□ -0.62
MKS1-203ENST00000393120 DCHS2Q6V1P9 2916 aa11.2□□□□□ -0.62
MKS1-203ENST00000393120 LINC00587B1AMM8 73 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 CA1P00915 261 aaPredicted RBP11.19□□□□□ -0.62
MKS1-203ENST00000393120 IGLV2-11P01706 119 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 CTSGP08311 255 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 SIGLEC15Q6ZMC9 328 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 EXOC3-AS1Q8N2X6 119 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 C10orf105Q8TEF2 133 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 ZNF414Q96IQ9 312 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 CCL19Q99731 98 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 HSPB9Q9BQS6 159 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 FBXL7Q9UJT9 491 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 TP53TG3Q9ULZ0 132 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 RPH3ALQ9UNE2 315 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 CACNA1AO00555 2505 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 OR2J3O76001 311 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 CTAG1AP78358 180 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 NUP35Q8NFH5 326 aa11.19□□□□□ -0.62
MKS1-203ENST00000393120 ZNF331Q9NQX6 463 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms