RNA–Protein interactions for RNA: ENST00000391141.1

SNORA53-201, Transcript of small nucleolar RNA, H/ACA box 53, humanhuman

BASIC

Gene SNORA53, Length 249 nt, Biotype snoRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA53-201ENST00000391141 TNNC1P63316 161 aa-1.19□□□□□ -2.6
SNORA53-201ENST00000391141 SYCP1Q15431 976 aa-1.19□□□□□ -2.6
SNORA53-201ENST00000391141 ZNHIT3Q15649 155 aaPredicted RBP-1.19□□□□□ -2.6
SNORA53-201ENST00000391141 LINC00299Q6ZSB3 139 aa-1.19□□□□□ -2.6
SNORA53-201ENST00000391141 SLC51BQ86UW2 128 aa-1.19□□□□□ -2.6
SNORA53-201ENST00000391141 KLK6Q92876 244 aa-1.19□□□□□ -2.6
SNORA53-201ENST00000391141 TOMM6Q96B49 74 aa-1.19□□□□□ -2.6
SNORA53-201ENST00000391141 SLAMF6Q96DU3 332 aa-1.19□□□□□ -2.6
SNORA53-201ENST00000391141 NIPSNAP1Q9BPW8 284 aa-1.19□□□□□ -2.6
SNORA53-201ENST00000391141 LIMD2Q9BT23 127 aa-1.19□□□□□ -2.6
SNORA53-201ENST00000391141 GGACTQ9BVM4 153 aa-1.19□□□□□ -2.6
SNORA53-201ENST00000391141 EPPK1P58107 5090 aaKnown RBP-1.19□□□□□ -2.6
SNORA53-201ENST00000391141 CSPG4Q6UVK1 2322 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 SOGA1O94964 1423 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 A0A087X0T9 212 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 A0A0J9YY99 117 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 TINCRA0A1B0GVN0 87 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 DPRXA6NFQ7 191 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 FTCDNL1E5RQL4 147 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 SYT1P21579 422 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 EVI2AP22794 236 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 S100A4P26447 101 aaKnown RBP-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 CDC34P49427 236 aaPredicted RBP-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 AP2S1P53680 142 aaPredicted RBP-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 YPEL3P61236 119 aaPredicted RBP-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 RBM3P98179 157 aaKnown RBP-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 CDK6Q00534 326 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 SPAG11BQ08648 103 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 SLAMF1Q13291 335 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 PPP1R1AQ13522 171 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 FBXO48Q5FWF7 155 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 TNFAIP8L2Q6P589 184 aaPredicted RBP-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 SLC30A7Q8NEW0 376 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 CCDC124Q96CT7 223 aaKnown RBP-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 ADAT3Q96EY9 351 aaPredicted RBP-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 HIST1H2BLQ99880 126 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 SLC25A21Q9BQT8 299 aaPredicted RBP-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 LINC00467Q9BRT7 94 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 PRR15LQ9BU68 103 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 C11orf68Q9H3H3 251 aaKnown RBP-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 C1orf109Q9NX04 203 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 FBXL12Q9NXK8 326 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 LY96Q9Y6Y9 160 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 RIMBP3CA6NJZ7 1639 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 RIMBP3BA6NNM3 1639 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 RIMBP3Q9UFD9 1639 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 SETD2Q9BYW2 2564 aaPredicted RBP-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 ABCA1O95477 2261 aa-1.2□□□□□ -2.6
SNORA53-201ENST00000391141 PLXND1Q9Y4D7 1925 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 NHSL1Q5SYE7 1610 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 TGP01266 2768 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 MKRN2OSH3BPM6 223 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 PIRO00625 290 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 OR7C1O76099 320 aaPredicted RBP-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 CSTAP01040 98 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 IGHV3-33P01772 117 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 ORM1P02763 201 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 KDELR2P33947 212 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 MARCKSL1P49006 195 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 RSU1Q15404 277 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 C1orf134Q5TEV5 83 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 SYCE1Q8N0S2 351 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 LRRC20Q8TCA0 184 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 RAB37Q96AX2 223 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 MALSU1Q96EH3 234 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 Q96NJ1 140 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 DHRS9Q9BPW9 319 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 PRADC1Q9BSG0 188 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 NCOR1P1Q9H4R4 102 aa-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 CNOT1A5YKK6 2376 aaKnown RBP-1.21□□□□□ -2.6
SNORA53-201ENST00000391141 MYLKQ15746 1914 aa-1.22□□□□□ -2.6
SNORA53-201ENST00000391141 A0A1B0GV50 99 aa-1.22□□□□□ -2.6
SNORA53-201ENST00000391141 A0A1W2PRS3 328 aa-1.22□□□□□ -2.6
SNORA53-201ENST00000391141 A8MWV9 139 aa-1.22□□□□□ -2.6
SNORA53-201ENST00000391141 IGHV3-30P01768 117 aa-1.22□□□□□ -2.6
SNORA53-201ENST00000391141 IGHV3-30-5P0DP03 117 aa-1.22□□□□□ -2.6
SNORA53-201ENST00000391141 WFDC2Q14508 124 aa-1.22□□□□□ -2.6
SNORA53-201ENST00000391141 CD302Q8IX05 232 aa-1.22□□□□□ -2.6
SNORA53-201ENST00000391141 OR10K1Q8NGX5 313 aa-1.22□□□□□ -2.6
SNORA53-201ENST00000391141 PPTC7Q8NI37 304 aa-1.22□□□□□ -2.6
SNORA53-201ENST00000391141 SPANXB1Q9NS25 103 aaPredicted RBP-1.22□□□□□ -2.6
SNORA53-201ENST00000391141 MXRA5Q9NR99 2828 aa-1.22□□□□□ -2.61
SNORA53-201ENST00000391141 PRKDCP78527 4128 aaKnown RBP-1.22□□□□□ -2.61
SNORA53-201ENST00000391141 DOCK5Q9H7D0 1870 aa-1.22□□□□□ -2.61
SNORA53-201ENST00000391141 COL24A1Q17RW2 1714 aa-1.23□□□□□ -2.61
SNORA53-201ENST00000391141 EXOC1LA0A1B0GW35 172 aa-1.23□□□□□ -2.61
SNORA53-201ENST00000391141 M0R233 179 aa-1.23□□□□□ -2.61
SNORA53-201ENST00000391141 UGT2B7P16662 529 aa-1.23□□□□□ -2.61
SNORA53-201ENST00000391141 RPS3P23396 243 aaKnown RBP eCLIP-1.23□□□□□ -2.61
SNORA53-201ENST00000391141 LCN1P31025 176 aa-1.23□□□□□ -2.61
SNORA53-201ENST00000391141 CD200R1LQ6Q8B3 271 aa-1.23□□□□□ -2.61
SNORA53-201ENST00000391141 COMMD7Q86VX2 200 aa-1.23□□□□□ -2.61
SNORA53-201ENST00000391141 C5orf17Q8NAS9 161 aa-1.23□□□□□ -2.61
SNORA53-201ENST00000391141 DDI1Q8WTU0 396 aa-1.23□□□□□ -2.61
SNORA53-201ENST00000391141 SMIM19Q96E16 107 aa-1.23□□□□□ -2.61
SNORA53-201ENST00000391141 BCL7BQ9BQE9 202 aa-1.23□□□□□ -2.61
SNORA53-201ENST00000391141 CYSLTR1Q9Y271 337 aa-1.23□□□□□ -2.61
SNORA53-201ENST00000391141 CTTNBP2Q8WZ74 1663 aa-1.23□□□□□ -2.61
SNORA53-201ENST00000391141 ATG2AQ2TAZ0 1938 aa-1.24□□□□□ -2.61
SNORA53-201ENST00000391141 TRAV27A0A087WT01 109 aa-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms