RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 SMAD7O15105 426 aaKnown RBP10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 TMEM42Q69YG0 159 aa10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 IGHV3-64A0A075B6Q5 118 aa10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 MALP21145 153 aa10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 TMEM86BQ8N661 226 aa10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 AHRRA9YTQ3 701 aa10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 LINC00114Q6XXX2 140 aa10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 PSG8Q9UQ74 426 aa10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 TSSC4Q9Y5U2 329 aaPredicted RBP10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 K7EP13 123 aa10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 ZNF497Q6ZNH5 498 aa10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 GFI1Q99684 422 aa10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 C1QTNF5Q9BXJ0 243 aa10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 GFRA3O60609 400 aa10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 CDK2AP2O75956 126 aa10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 CELA2AP08217 269 aa10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 ZNF784Q8NCA9 323 aaPredicted RBP10.36□□□□□ -0.75
SRGAP3-202ENST00000383836 IGHV3OR16-13A0A075B7E8 117 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 IGHV3-74A0A0B4J1X5 117 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 PPP1R27Q86WC6 154 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 ARPC1AQ92747 370 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 H3BMM0 161 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 SSC4DQ8WTU2 575 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 UBE2WQ96B02 151 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 C9JAW5 83 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 RTN4RL2Q86UN3 420 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 SLC50A1Q9BRV3 221 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 MRPL20Q9BYC9 149 aaKnown RBP10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 TRBV20-1A0A075B6N2 111 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 LINC00271P0C7V0 271 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 PVRIGQ6DKI7 326 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 CD7P09564 240 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 SUPT4H1P63272 117 aaKnown RBP10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 LTBP1Q14766 1721 aa10.35□□□□□ -0.75
SRGAP3-202ENST00000383836 A0A0A6YYD4 124 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 FAM89BQ8N5H3 189 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 IGHV3-49A0A0A0MS15 119 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 LYL1P12980 280 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 SRSF7Q16629 238 aaKnown RBP eCLIP10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 NRN1LQ496H8 165 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 OR13A1Q8NGR1 328 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 PLEKHB2Q96CS7 222 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 TOMM40O96008 361 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 AZU1P20160 251 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 FBXL7Q9UJT9 491 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 CDKN1BP46527 198 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 Q0VG73 95 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 C8orf46Q8TAG6 207 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 SAA2-SAA4A0A096LPE2 208 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 GAGE12HA6NDE8 117 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 SAA2P0DJI9 122 aaPredicted RBP10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 CD33P20138 364 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 PPDPFLQ8WWR9 84 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 GAGE2AQ6NT46 116 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 FAM90A1Q86YD7 464 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 SLC22A18ASQ8N1D0 253 aa10.34□□□□□ -0.75
SRGAP3-202ENST00000383836 YPEL1O60688 119 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 TRGV3P03979 118 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 GATD1Q8NB37 220 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 YPEL2Q96QA6 119 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 S4R3C0 116 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 UPK2O00526 184 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 FOXL2P58012 376 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 TREML4Q6UXN2 200 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 RNF125Q96EQ8 232 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 NPC2P61916 151 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 FAM57AQ8TBR7 257 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 VGLL1Q99990 258 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 FBXL15Q9H469 300 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 CCL1P22362 96 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 UBE2DNLQ8IWF7 75 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 REPIN1Q9BWE0 567 aaKnown RBP10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 IGKV1D-43A0A0B4J1Z2 117 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 TRACP01848 142 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 IGLV3-21P80748 117 aaPredicted RBP10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 PAQR4Q8N4S7 273 aaPredicted RBP10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 SLC25A39Q9BZJ4 359 aaPredicted RBP10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 WDR83OSQ9Y284 106 aa10.33□□□□□ -0.76
SRGAP3-202ENST00000383836 LHFPL1Q86WI0 220 aa10.32□□□□□ -0.76
SRGAP3-202ENST00000383836 GGTLC1Q9BX51 225 aa10.32□□□□□ -0.76
SRGAP3-202ENST00000383836 K7EP34 96 aa10.32□□□□□ -0.76
SRGAP3-202ENST00000383836 RPP25LQ8N5L8 163 aaKnown RBP10.32□□□□□ -0.76
SRGAP3-202ENST00000383836 ZNF319Q9P2F9 582 aa10.32□□□□□ -0.76
SRGAP3-202ENST00000383836 CT83Q5H943 113 aa10.32□□□□□ -0.76
SRGAP3-202ENST00000383836 DNAJC30Q96LL9 226 aa10.32□□□□□ -0.76
SRGAP3-202ENST00000383836 TRAV8-3A0A0A6YYJ7 113 aa10.32□□□□□ -0.76
SRGAP3-202ENST00000383836 PRCDQ00LT1 54 aa10.32□□□□□ -0.76
SRGAP3-202ENST00000383836 MRAPQ8TCY5 172 aa10.32□□□□□ -0.76
SRGAP3-202ENST00000383836 IGKV1D-33P01593 117 aa10.31□□□□□ -0.76
SRGAP3-202ENST00000383836 IGKV1-33P01594 117 aa10.31□□□□□ -0.76
SRGAP3-202ENST00000383836 NCR2O95944 276 aa10.31□□□□□ -0.76
SRGAP3-202ENST00000383836 IGHV2-5P01817 119 aa10.31□□□□□ -0.76
SRGAP3-202ENST00000383836 RSPO4Q2I0M5 234 aaPredicted RBP10.31□□□□□ -0.76
SRGAP3-202ENST00000383836 HIVEP3Q5T1R4 2406 aa10.31□□□□□ -0.76
SRGAP3-202ENST00000383836 FOXH1O75593 365 aa10.31□□□□□ -0.76
SRGAP3-202ENST00000383836 SIGLEC12Q96PQ1 595 aa10.3□□□□□ -0.76
SRGAP3-202ENST00000383836 VWC2LB2RUY7 222 aa10.3□□□□□ -0.76
SRGAP3-202ENST00000383836 MORN2Q502X0 79 aa10.3□□□□□ -0.76
SRGAP3-202ENST00000383836 A0A087WV48 116 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms