RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 H3BRN7 92 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 MT-ND4LP03901 98 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 NBEAP1P0C6P0 100 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 BLCAPP62952 87 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 RNF212Q495C1 297 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 OR5R1Q8NH85 324 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 YPEL4Q96NS1 127 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 TRBV20OR9-2A0A075B6H5 130 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 BRI3O95415 125 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 IGHV4-59P01825 116 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 CRYBB3P26998 211 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 ADMP35318 185 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 WFDC11Q8NEX6 87 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 HIST1H2BAQ96A08 127 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 EEF1AKMT3Q96AZ1 226 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 TCEAL7Q9BRU2 100 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 CHRDL1Q9BU40 450 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 ELOVL1Q9BW60 279 aa16.74■□□□□ 0.27
GMDS-202ENST00000380815 TRBV7-1A0A0A6YYK4 115 aa16.73■□□□□ 0.27
GMDS-202ENST00000380815 FAM223BA6NKX1 122 aa16.73■□□□□ 0.27
GMDS-202ENST00000380815 C9JCJ5 164 aa16.73■□□□□ 0.27
GMDS-202ENST00000380815 MYCNOSP40205 109 aa16.73■□□□□ 0.27
GMDS-202ENST00000380815 RPL35P42766 123 aaKnown RBP16.73■□□□□ 0.27
GMDS-202ENST00000380815 USF2Q15853 346 aaPredicted RBP16.73■□□□□ 0.27
GMDS-202ENST00000380815 ZNF600Q6ZNG1 722 aa16.73■□□□□ 0.27
GMDS-202ENST00000380815 FAM223AQ8IWN6 122 aa16.73■□□□□ 0.27
GMDS-202ENST00000380815 FAM24BQ8N5W8 94 aa16.73■□□□□ 0.27
GMDS-202ENST00000380815 C2CD4CQ8TF44 421 aa16.73■□□□□ 0.27
GMDS-202ENST00000380815 MS4A10Q96PG2 267 aa16.73■□□□□ 0.27
GMDS-202ENST00000380815 ATP6V0BQ99437 205 aa16.73■□□□□ 0.27
GMDS-202ENST00000380815 LINC00527Q9UJ94 153 aa16.73■□□□□ 0.27
GMDS-202ENST00000380815 ZFHX3Q15911 3703 aa16.73■□□□□ 0.27
GMDS-202ENST00000380815 CLDN34H7C241 214 aa16.72■□□□□ 0.27
GMDS-202ENST00000380815 CLEC3BP05452 202 aa16.72■□□□□ 0.27
GMDS-202ENST00000380815 ATF4P18848 351 aaPredicted RBP16.72■□□□□ 0.27
GMDS-202ENST00000380815 ZNF329Q86UD4 541 aa16.72■□□□□ 0.27
GMDS-202ENST00000380815 HELTA6NFD8 242 aa16.72■□□□□ 0.27
GMDS-202ENST00000380815 H3BUA1 57 aa16.72■□□□□ 0.27
GMDS-202ENST00000380815 AP4M1O00189 453 aa16.72■□□□□ 0.27
GMDS-202ENST00000380815 PPIFP30405 207 aaKnown RBP16.72■□□□□ 0.27
GMDS-202ENST00000380815 GPR183P32249 361 aa16.72■□□□□ 0.27
GMDS-202ENST00000380815 ATP5G2Q06055 141 aa16.72■□□□□ 0.27
GMDS-202ENST00000380815 CCDC140Q96MF4 163 aa16.72■□□□□ 0.27
GMDS-202ENST00000380815 LY96Q9Y6Y9 160 aa16.72■□□□□ 0.27
GMDS-202ENST00000380815 BPIFA4PQ86YQ2 179 aa16.71■□□□□ 0.27
GMDS-202ENST00000380815 BLNKQ8WV28 456 aa16.71■□□□□ 0.27
GMDS-202ENST00000380815 ANAPC16Q96DE5 110 aa16.71■□□□□ 0.27
GMDS-202ENST00000380815 ZNF580Q9UK33 172 aa16.71■□□□□ 0.27
GMDS-202ENST00000380815 HIST1H1EP10412 219 aaKnown RBP16.7■□□□□ 0.26
GMDS-202ENST00000380815 RANP62826 216 aaKnown RBP16.7■□□□□ 0.26
GMDS-202ENST00000380815 Q6YL49 198 aa16.7■□□□□ 0.26
GMDS-202ENST00000380815 RNF24Q9Y225 148 aa16.7■□□□□ 0.26
GMDS-202ENST00000380815 ZNF98A6NK75 572 aa16.69■□□□□ 0.26
GMDS-202ENST00000380815 CD99P14209 185 aa16.69■□□□□ 0.26
GMDS-202ENST00000380815 ELOBQ15370 118 aa16.69■□□□□ 0.26
GMDS-202ENST00000380815 Q6ZS46 218 aa16.69■□□□□ 0.26
GMDS-202ENST00000380815 NOL4LQ96MY1 436 aaPredicted RBP16.69■□□□□ 0.26
GMDS-202ENST00000380815 PRDM13Q9H4Q3 707 aa16.69■□□□□ 0.26
GMDS-202ENST00000380815 PGPEP1LA6NFU8 196 aa16.69■□□□□ 0.26
GMDS-202ENST00000380815 TRGV3P03979 118 aa16.69■□□□□ 0.26
GMDS-202ENST00000380815 CRYBA1P05813 215 aa16.69■□□□□ 0.26
GMDS-202ENST00000380815 SNRPCP09234 159 aaKnown RBP16.69■□□□□ 0.26
GMDS-202ENST00000380815 FOLR2P14207 255 aa16.69■□□□□ 0.26
GMDS-202ENST00000380815 CLEC19AQ6UXS0 136 aa16.69■□□□□ 0.26
GMDS-202ENST00000380815 OCC1Q8TAD7 63 aa16.69■□□□□ 0.26
GMDS-202ENST00000380815 FOXC2Q99958 501 aa16.69■□□□□ 0.26
GMDS-202ENST00000380815 TGOLN2O43493 480 aa16.68■□□□□ 0.26
GMDS-202ENST00000380815 CIARTQ8N365 385 aaPredicted RBP16.68■□□□□ 0.26
GMDS-202ENST00000380815 ZNF414Q96IQ9 312 aa16.68■□□□□ 0.26
GMDS-202ENST00000380815 ZNF586Q9NXT0 402 aa16.68■□□□□ 0.26
GMDS-202ENST00000380815 VPREB3Q9UKI3 123 aa16.68■□□□□ 0.26
GMDS-202ENST00000380815 H7BYZ3 331 aa16.67■□□□□ 0.26
GMDS-202ENST00000380815 RAB5AP20339 215 aa16.67■□□□□ 0.26
GMDS-202ENST00000380815 S100A7P31151 101 aa16.67■□□□□ 0.26
GMDS-202ENST00000380815 GNG4P50150 75 aa16.67■□□□□ 0.26
GMDS-202ENST00000380815 OR4F17Q8NGA8 305 aa16.67■□□□□ 0.26
GMDS-202ENST00000380815 TMEM190Q8WZ59 177 aa16.67■□□□□ 0.26
GMDS-202ENST00000380815 AURKAIP1Q9NWT8 199 aaPredicted RBP16.67■□□□□ 0.26
GMDS-202ENST00000380815 URGCP-MRPS24S4R325 110 aa16.67■□□□□ 0.26
GMDS-202ENST00000380815 ITPR3Q14573 2671 aa16.67■□□□□ 0.26
GMDS-202ENST00000380815 PGPA6NDG6 321 aa16.66■□□□□ 0.26
GMDS-202ENST00000380815 BMPR1BO00238 502 aa16.66■□□□□ 0.26
GMDS-202ENST00000380815 PEX7O00628 323 aa16.66■□□□□ 0.26
GMDS-202ENST00000380815 MRPS12O15235 138 aaKnown RBP16.66■□□□□ 0.26
GMDS-202ENST00000380815 IGLC2P0DOY2 106 aa16.66■□□□□ 0.26
GMDS-202ENST00000380815 CENPWQ5EE01 88 aa16.66■□□□□ 0.26
GMDS-202ENST00000380815 TEX29Q8N6K0 151 aa16.66■□□□□ 0.26
GMDS-202ENST00000380815 USMG5Q96IX5 58 aa16.66■□□□□ 0.26
GMDS-202ENST00000380815 RABAC1Q9UI14 185 aa16.66■□□□□ 0.26
GMDS-202ENST00000380815 CDC42EP3Q9UKI2 254 aa16.66■□□□□ 0.26
GMDS-202ENST00000380815 TPPP2P59282 170 aa16.66■□□□□ 0.26
GMDS-202ENST00000380815 TAS2R60P59551 318 aa16.66■□□□□ 0.26
GMDS-202ENST00000380815 TOMM20LQ6UXN7 152 aa16.66■□□□□ 0.26
GMDS-202ENST00000380815 Q9H3A6 140 aa16.66■□□□□ 0.26
GMDS-202ENST00000380815 EPDR1Q9UM22 224 aa16.66■□□□□ 0.26
GMDS-202ENST00000380815 PDZD2O15018 2839 aa16.65■□□□□ 0.26
GMDS-202ENST00000380815 TEX15Q9BXT5 2789 aa16.65■□□□□ 0.26
GMDS-202ENST00000380815 PPP1R2P9O14990 202 aa16.65■□□□□ 0.26
GMDS-202ENST00000380815 IGLV1-40P01703 118 aa16.65■□□□□ 0.26
GMDS-202ENST00000380815 CNN1P51911 297 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms