RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 CACNG8Q8WXS5 425 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 SIGMAR1Q99720 223 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 ZFAND6Q6FIF0 208 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 MESP1Q9BRJ9 268 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 FREM3P0C091 2139 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 GAGE2BQ13066 116 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 RIPPLY2Q5TAB7 128 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 FAM186AA6NE01 2351 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 IGKV1D-13A0A0B4J2D9 117 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 TMEM238C9JI98 176 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 IGKV1-13P0DP09 117 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 COX5BP10606 129 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 SCRT2Q9NQ03 307 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 J3QW42 95 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 LINC00205P59089 165 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 TINCRA0A1B0GVN0 87 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 B4DSR2 109 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 IGHG3P01860 377 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 SLC25A16P16260 332 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 PVRIGQ6DKI7 326 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 C5orf24Q7Z6I8 188 aa10.24□□□□□ -0.77
CHD3-203ENST00000380358 A0A087X0K7 114 aa10.23□□□□□ -0.77
CHD3-203ENST00000380358 SHANK3Q9BYB0 1731 aa10.23□□□□□ -0.77
CHD3-203ENST00000380358 IGKV1-39P01597 117 aa10.23□□□□□ -0.77
CHD3-203ENST00000380358 IGKV1D-39P04432 117 aa10.23□□□□□ -0.77
CHD3-203ENST00000380358 CHKB-CPT1BH3BT56 60 aa10.23□□□□□ -0.77
CHD3-203ENST00000380358 UBE2E1P51965 193 aa10.23□□□□□ -0.77
CHD3-203ENST00000380358 FOXG1P55316 489 aaPredicted RBP10.23□□□□□ -0.77
CHD3-203ENST00000380358 SMIM2Q9BVW6 85 aa10.23□□□□□ -0.77
CHD3-203ENST00000380358 C15orf61A6NNL5 157 aa10.23□□□□□ -0.77
CHD3-203ENST00000380358 Q6ZQT7 251 aa10.23□□□□□ -0.77
CHD3-203ENST00000380358 IQCF6A8MYZ5 107 aa10.23□□□□□ -0.77
CHD3-203ENST00000380358 RNF166Q96A37 237 aaPredicted RBP10.23□□□□□ -0.77
CHD3-203ENST00000380358 ANGP03950 147 aaKnown RBP10.23□□□□□ -0.77
CHD3-203ENST00000380358 PRSS29PA6NIE9 313 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 OVOL3O00110 214 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 SH2D1AO60880 128 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 COL8A2P25067 703 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 LINC01356Q8N9X3 169 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 OCC1Q8TAD7 63 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 LAMTOR2Q9Y2Q5 125 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 AZU1P20160 251 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 IRF3Q14653 427 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 C1orf53Q5VUE5 145 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 TIMM21Q9BVV7 248 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 ANKRD36A6QL64 1941 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 C9JAW5 83 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 TMEM30BQ3MIR4 351 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 RSPO3Q9BXY4 272 aaPredicted RBP10.22□□□□□ -0.77
CHD3-203ENST00000380358 TRBV5-7A0A0A0MS05 114 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 MORN5Q5VZ52 161 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 DTX1Q86Y01 620 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 SPOCK3Q9BQ16 436 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 VSIRQ9H7M9 311 aa10.22□□□□□ -0.77
CHD3-203ENST00000380358 E9PQ18 207 aa10.21□□□□□ -0.77
CHD3-203ENST00000380358 ZNRD1Q9P1U0 126 aa10.21□□□□□ -0.77
CHD3-203ENST00000380358 EFNA4P52798 201 aa10.21□□□□□ -0.77
CHD3-203ENST00000380358 LCN12Q6JVE5 192 aa10.21□□□□□ -0.77
CHD3-203ENST00000380358 RHPN1-AS1Q9BWJ2 59 aa10.21□□□□□ -0.77
CHD3-203ENST00000380358 TRAV9-2A0A087WT02 112 aa10.21□□□□□ -0.77
CHD3-203ENST00000380358 TCF15Q12870 199 aa10.21□□□□□ -0.77
CHD3-203ENST00000380358 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.21□□□□□ -0.77
CHD3-203ENST00000380358 FGFBP3Q8TAT2 258 aa10.21□□□□□ -0.77
CHD3-203ENST00000380358 ESM1Q9NQ30 184 aa10.21□□□□□ -0.77
CHD3-203ENST00000380358 CACNA1BQ00975 2339 aa10.21□□□□□ -0.78
CHD3-203ENST00000380358 SEC11AP67812 179 aa10.21□□□□□ -0.78
CHD3-203ENST00000380358 Q6AWC8 147 aa10.21□□□□□ -0.78
CHD3-203ENST00000380358 IGHV1-3A0A0C4DH29 117 aa10.21□□□□□ -0.78
CHD3-203ENST00000380358 BCL6BQ8N143 479 aaPredicted RBP10.21□□□□□ -0.78
CHD3-203ENST00000380358 ADAMTSL1Q8N6G6 1762 aa10.21□□□□□ -0.78
CHD3-203ENST00000380358 EFNB3Q15768 340 aa10.21□□□□□ -0.78
CHD3-203ENST00000380358 PRR30Q53SZ7 412 aaPredicted RBP10.21□□□□□ -0.78
CHD3-203ENST00000380358 CITED1Q99966 193 aa10.21□□□□□ -0.78
CHD3-203ENST00000380358 PLCE1Q9P212 2302 aa10.2□□□□□ -0.78
CHD3-203ENST00000380358 FOCADQ5VW36 1801 aa10.2□□□□□ -0.78
CHD3-203ENST00000380358 DOCK11Q5JSL3 2073 aa10.2□□□□□ -0.78
CHD3-203ENST00000380358 TMEM158Q8WZ71 300 aa10.2□□□□□ -0.78
CHD3-203ENST00000380358 A0A0G2JNJ9 132 aa10.2□□□□□ -0.78
CHD3-203ENST00000380358 VWC2Q2TAL6 325 aa10.2□□□□□ -0.78
CHD3-203ENST00000380358 C1orf100Q5SVJ3 147 aa10.2□□□□□ -0.78
CHD3-203ENST00000380358 Q9UFV3 132 aa10.2□□□□□ -0.78
CHD3-203ENST00000380358 NDUFAF3Q9BU61 184 aa10.2□□□□□ -0.78
CHD3-203ENST00000380358 TRAV3A0A0B4J244 114 aa10.2□□□□□ -0.78
CHD3-203ENST00000380358 LRCOL1A6NCL2 159 aa10.2□□□□□ -0.78
CHD3-203ENST00000380358 EFNA2O43921 213 aa10.2□□□□□ -0.78
CHD3-203ENST00000380358 RTBDNQ9BSG5 229 aaPredicted RBP10.2□□□□□ -0.78
CHD3-203ENST00000380358 TCF20Q9UGU0 1960 aaKnown RBP10.2□□□□□ -0.78
CHD3-203ENST00000380358 TMEM14DPA8MWL7 114 aa10.2□□□□□ -0.78
CHD3-203ENST00000380358 KIF26BQ2KJY2 2108 aa10.2□□□□□ -0.78
CHD3-203ENST00000380358 SRP19P09132 144 aaKnown RBP10.19□□□□□ -0.78
CHD3-203ENST00000380358 LYPD2Q6UXB3 125 aa10.19□□□□□ -0.78
CHD3-203ENST00000380358 PPP1R3EQ9H7J1 279 aa10.19□□□□□ -0.78
CHD3-203ENST00000380358 SAA4P35542 130 aa10.19□□□□□ -0.78
CHD3-203ENST00000380358 NEGR1Q7Z3B1 354 aa10.19□□□□□ -0.78
CHD3-203ENST00000380358 LRRK1Q38SD2 2015 aa10.19□□□□□ -0.78
CHD3-203ENST00000380358 E9PLN8 166 aa10.19□□□□□ -0.78
CHD3-203ENST00000380358 A0A1W2PRE2 83 aa10.19□□□□□ -0.78
CHD3-203ENST00000380358 F2Z2F3 143 aa10.19□□□□□ -0.78
CHD3-203ENST00000380358 DSCR9P59020 149 aa10.19□□□□□ -0.78
CHD3-203ENST00000380358 SRSF3P84103 164 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms