RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 TMEM116Q8NCL8 245 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 GGACTQ9BVM4 153 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 ATG2AQ2TAZ0 1938 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 LOC102723971A0A1B0GUV8 181 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 MFSD2BA6NFX1 497 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 WIPF3A6NGB9 483 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 HSBP1O75506 76 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 PVRIGQ6DKI7 326 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 TREML4Q6UXN2 200 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 USMG5Q96IX5 58 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 SMR3AQ99954 134 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 SCRT1Q9BWW7 348 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 RIPPLY3P57055 190 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 C16orf54Q6UWD8 224 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 FA2HQ7L5A8 372 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 C11orf42Q8N5U0 333 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 C19orf24Q9BVV8 132 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 MRPL32Q9BYC8 188 aaKnown RBP6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 RFNGQ9Y644 331 aa6.78□□□□□ -1.32
CRNKL1-202ENST00000377340 TANC2Q9HCD6 1990 aa6.77□□□□□ -1.32
CRNKL1-202ENST00000377340 H3BQ15 152 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 M0R381 172 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 RNASE4P34096 147 aaKnown RBP6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 FXYD7P58549 80 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 TWIST1Q15672 202 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 ZNF833PQ6ZTB9 187 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 OR4D5Q8NGN0 318 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 UBE2E2Q96LR5 201 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 BPTFQ12830 3046 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 PPP1R2P9O14990 202 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 ZNF25P17030 456 aaPredicted RBP6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 KRTAP27-1Q3LI81 207 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 C2orf83Q53S99 150 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 ACTL10Q5JWF8 245 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 TRGV2A0A075B6R0 118 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 GRIFINA4D1Z8 144 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 RNF222A6NCQ9 220 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 FCN3O75636 299 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 SCGB1D1O95968 90 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 GNG5P63218 68 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 STPG2Q8N412 459 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 LINC00311Q8N616 119 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 SGMS2Q8NHU3 365 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 TCEAL7Q9BRU2 100 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 TRAPPC1Q9Y5R8 145 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 SEC14L6B5MCN3 397 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 ITGB1BP1O14713 200 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 CIDEAO60543 219 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 RNASE2P10153 161 aaKnown RBP6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 SIGLEC15Q6ZMC9 328 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 Q8N7P7 452 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 LRTM2Q8N967 370 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 MRAPQ8TCY5 172 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 FAM210BQ96KR6 192 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 WDR83OSQ9Y284 106 aa6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 SOX21Q9Y651 276 aaPredicted RBP6.77□□□□□ -1.33
CRNKL1-202ENST00000377340 NCKAP5O14513 1909 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 A0A1W2PPR1 153 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 GCGP01275 180 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 MDKP21741 143 aaPredicted RBP6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 FBLN7Q53RD9 439 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 AWAT1Q58HT5 328 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 IBA57Q5T440 356 aaKnown RBP6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 SPSB3Q6PJ21 355 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 Q9H3A6 140 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 NCOR1P1Q9H4R4 102 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 TRBV7-1A0A0A6YYK4 115 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 TMEM218A2RU14 115 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 COL5A1P20908 1838 aaPredicted RBP6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 LOXL1Q08397 574 aaPredicted RBP6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 FAM71F2Q6NXP2 309 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 PSMG3Q9BT73 122 aaPredicted RBP6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 ITPR3Q14573 2671 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 IGKV3OR2-268A0A0C4DH90 116 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 A8MWL6 223 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 RPLP1P05386 114 aaKnown RBP6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 WT1-ASQ06250 92 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 RNASEKQ6P5S7 137 aaKnown RBP6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 C8orf86Q6ZUL3 223 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 AGMATQ9BSE5 352 aa6.76□□□□□ -1.33
CRNKL1-202ENST00000377340 SNURFLB1AK76 121 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 NMBP08949 121 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 IER3P46695 156 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 ATP5G3P48201 142 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 OR11H6Q8NGC7 330 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 PMCHP20382 165 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 RIGQ13278 110 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 EXOC3-AS1Q8N2X6 119 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 Q8NFD4 153 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 RITA1Q96K30 269 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 SLC25A39Q9BZJ4 359 aaPredicted RBP6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 DAZ1Q9NQZ3 744 aaKnown RBP6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 FAM90A9PA6NNJ1 464 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 C15orf62A8K5M9 175 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 FAM3BP58499 235 aaPredicted RBP6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 DEFB131AP59861 70 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 PGLYRP4Q96LB8 373 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 GGTLC1Q9BX51 225 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 C7orf77A4D0Y5 90 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 OR11H12B2RN74 326 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms