RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 TMEM249Q2WGJ8 235 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 SPRNQ5BIV9 151 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 SPANXN1Q5VSR9 72 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 SPATA31B1PQ5VZV4 182 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 PGLYRP4Q96LB8 373 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 GSX1Q9H4S2 264 aaPredicted RBP4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 UFC1Q9Y3C8 167 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 S4R3C0 116 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 PIEZO1Q92508 2521 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 TRAV41A0A0B4J266 112 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 IGHV2-70DA0A0C4DH43 119 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 IGHV3-23P01764 117 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 CSN3P07498 182 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 PMCHL1Q16048 86 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 DMRTC2Q8IXT2 367 aaPredicted RBP4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 DDB2Q92466 427 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 SGK494Q96LW2 274 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 MAP1LC3CQ9BXW4 147 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 NPFFR1Q9GZQ6 430 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 HTTP42858 3142 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 PRR14LQ5THK1 2151 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 LYPD1Q8N2G4 141 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 SLC25A39Q9BZJ4 359 aaPredicted RBP4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 CPAMD8Q8IZJ3 1885 aa4.29□□□□□ -1.72
SMNDC1-202ENST00000369603 MED13LQ71F56 2210 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 TRAV5A0A0B4J249 113 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 K7ERU9 68 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 TOMM40O96008 361 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 IGLV2-14P01704 120 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 PFN1P07737 140 aaKnown RBP4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 SAA4P35542 130 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 ADORA2A-AS1P86434 159 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 TWIST1Q15672 202 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 ACTL10Q5JWF8 245 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 RBPMS2Q6ZRY4 209 aaKnown RBP4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 PRSS22Q9GZN4 317 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 LAMTOR2Q9Y2Q5 125 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.28□□□□□ -1.728e-7■■■■□ 23.4
SMNDC1-202ENST00000369603 PCNTO95613 3336 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 NCKAP5O14513 1909 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 TRBV7-1A0A0A6YYK4 115 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 SRRM4A7MD48 611 aaKnown RBP4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 F5H697 171 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 GRNP28799 593 aaKnown RBP4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 SNRPD3P62318 126 aaKnown RBP4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 ZNF726P1Q15940 193 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 C15orf32Q32M92 178 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 WFDC3Q8IUB2 231 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 LINC00574Q9H8X3 128 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 A0A1B0GUS0 222 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 A0A1B0GUT8 65 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 OR5AL1P0C617 328 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 TSPOP30536 169 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 WT1-ASQ06250 92 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 Q6ZPA2 131 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 GTF2H5Q6ZYL4 71 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 FAM19A2Q8N3H0 131 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 OR11H6Q8NGC7 330 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 NRN1Q9NPD7 142 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 ABCA1O95477 2261 aa4.28□□□□□ -1.72
SMNDC1-202ENST00000369603 CHD3Q12873 2000 aaKnown RBP4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 IFITM10A6NMD0 228 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 CKS2P33552 79 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 YPEL3P61236 119 aaPredicted RBP4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 MLANAQ16655 118 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 SMIM12Q96EX1 92 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 RNASE7Q9H1E1 156 aaKnown RBP4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 POLR3KQ9Y2Y1 108 aaPredicted RBP4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 C22orf46C9J442 243 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 FSTL3O95633 263 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 MSMBP08118 114 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 LINC00614P0C842 121 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 CGB3P0DN86 165 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 CGB7P0DN87 165 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 GNG5P63218 68 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 PAX8Q06710 450 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 TCF24Q7RTU0 167 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 TMEM116Q8NCL8 245 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 USMG5Q96IX5 58 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 ASCL2Q99929 193 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 DERL1Q9BUN8 251 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 GNB1LQ9BYB4 327 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 PSG8Q9UQ74 426 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 FAM223BA6NKX1 122 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 HIGD1CA8MV81 97 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 J3KRW8 73 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 TCRAP04437 139 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 GPX1P07203 203 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 PRR20EP86478 221 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 PRR20CP86479 221 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 PRR20DP86480 221 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 PRR20BP86481 221 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 PRR20AP86496 221 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 PDE6HQ13956 83 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 DAZAP2Q15038 168 aaPredicted RBP4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 RASL11AQ6T310 242 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 ATP5L2Q7Z4Y8 100 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 LHFPL4Q7Z7J7 247 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 DTX2Q86UW9 622 aa4.27□□□□□ -1.73
SMNDC1-202ENST00000369603 FAM223AQ8IWN6 122 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms