RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 HSBP1O75506 76 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 ACTL6BO94805 426 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 TSPOP30536 169 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 MYCNOSP40205 109 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 FABP6P51161 128 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 UBE2L3P68036 154 aaKnown RBP9.26□□□□□ -0.93
USF1-201ENST00000368019 ERHP84090 104 aaKnown RBP9.26□□□□□ -0.93
USF1-201ENST00000368019 LOXL1Q08397 574 aaPredicted RBP9.26□□□□□ -0.93
USF1-201ENST00000368019 LTC4SQ16873 150 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 ZNF833PQ6ZTB9 187 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 ZNF738Q8NE65 137 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 OR2Z1Q8NG97 314 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 VSTM2AQ8TAG5 236 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 TMEM158Q8WZ71 300 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 CHCHD1Q96BP2 118 aaKnown RBP9.26□□□□□ -0.93
USF1-201ENST00000368019 FAM103A1Q9BTL3 118 aaKnown RBP9.26□□□□□ -0.93
USF1-201ENST00000368019 SLC25A2Q9BXI2 301 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 GFRA4Q9GZZ7 299 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 C7orf69Q9H7B7 122 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 ZNF430Q9H8G1 570 aaPredicted RBP9.26□□□□□ -0.93
USF1-201ENST00000368019 AMMECR1Q9Y4X0 333 aaPredicted RBP9.26□□□□□ -0.93
USF1-201ENST00000368019 IGKV1OR2-108A0A075B7D4 117 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 C22orf46C9J442 243 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 H0YJW9 148 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 K7EP13 123 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 PEX7O00628 323 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 NDUFB8O95169 186 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 TFF1P04155 84 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 FRMD6-AS1P0C7T7 363 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 MGST1P10620 155 aaKnown RBP9.25□□□□□ -0.93
USF1-201ENST00000368019 CD40P25942 277 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 SUB1P53999 127 aaKnown RBP eCLIP9.25□□□□□ -0.93
USF1-201ENST00000368019 DSCR9P59020 149 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 UBE2G1P62253 170 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 TMEM177Q53S58 311 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 MRPL54Q6P161 138 aaKnown RBP9.25□□□□□ -0.93
USF1-201ENST00000368019 C1orf229Q6ZS94 237 aaPredicted RBP9.25□□□□□ -0.93
USF1-201ENST00000368019 STPG4Q8N801 248 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 C8orf31Q8N9H6 132 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 NHLRC2Q8NBF2 726 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 TMEM167AQ8TBQ9 72 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 ALKBH7Q9BT30 221 aaPredicted RBP9.25□□□□□ -0.93
USF1-201ENST00000368019 GAL3ST2Q9H3Q3 398 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 NDUFA4L2Q9NRX3 87 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 TMEM160Q9NX00 188 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 RPUSD1Q9UJJ7 312 aaKnown RBP9.25□□□□□ -0.93
USF1-201ENST00000368019 KLF12Q9Y4X4 402 aa9.25□□□□□ -0.93
USF1-201ENST00000368019 TCRBV4S1A1TA0A5B7 111 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 FAM181BA6NEQ2 426 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 APOA2P02652 100 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 OR5AL1P0C617 328 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 CT45A6P0DMU7 189 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 CT45A5P0DMU8 189 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 CT45A7P0DMV0 189 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 SLAQ13239 276 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 MMDQ15546 238 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 PVRIGQ6DKI7 326 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 TMEM108Q6UXF1 575 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 ZNF329Q86UD4 541 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 LYG1Q8N1E2 194 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 MUC15Q8N387 334 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 NUP35Q8NFH5 326 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 PAXXQ9BUH6 204 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 CLEC7AQ9BXN2 247 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 ST20Q9HBF5 79 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 RNF7Q9UBF6 113 aa9.24□□□□□ -0.93
USF1-201ENST00000368019 TRBV6-1A0A0K0K1D8 114 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 hADV38S2A0JD32 116 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 IGLC7A0M8Q6 106 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 NKX6-3A6NJ46 265 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 C2orf70A6NJV1 201 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 SLC25A16P16260 332 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 MEF2CQ06413 473 aaPredicted RBP9.23□□□□□ -0.93
USF1-201ENST00000368019 UBE2V1Q13404 147 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 FXYD3Q14802 87 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 BATFQ16520 125 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 KIAA1644Q3SXP7 199 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 TEX36Q5VZQ5 186 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 C10orf113Q5VZT2 155 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 LEMD1Q68G75 181 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 ETFRF1Q6IPR1 90 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 CLEC2AQ6UVW9 174 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 ZNF788Q6ZQV5 615 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 LINC00311Q8N616 119 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 NUDT10Q8NFP7 164 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 ZNF596Q8TC21 504 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 C10orf105Q8TEF2 133 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 NUDT11Q96G61 164 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 GCM1Q9NP62 436 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 TNFRSF19Q9NS68 423 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 SERTAD4Q9NUC0 356 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 LINC00312Q9Y6C7 94 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 COX11Q9Y6N1 276 aa9.23□□□□□ -0.93
USF1-201ENST00000368019 M0R2Z0 102 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 COX7A2P2O60397 106 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 HLA-DRB1P01911 266 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 SAA1P0DJI8 122 aaPredicted RBP9.22□□□□□ -0.93
USF1-201ENST00000368019 IGHV4-31P0DP07 118 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 MFAP2P55001 183 aa9.22□□□□□ -0.93
USF1-201ENST00000368019 RPL8P62917 257 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms