RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 RBPMS2Q6ZRY4 209 aaKnown RBP10.01□□□□□ -0.81
PCDHB11-201ENST00000354757 DLX6P56179 175 aa10.01□□□□□ -0.81
PCDHB11-201ENST00000354757 C5orf64Q2M2E5 130 aa10.01□□□□□ -0.81
PCDHB11-201ENST00000354757 TCF23Q7RTU1 214 aa10.01□□□□□ -0.81
PCDHB11-201ENST00000354757 ERASQ7Z444 233 aa10.01□□□□□ -0.81
PCDHB11-201ENST00000354757 PRSS3P2Q8NHM4 247 aa10.01□□□□□ -0.81
PCDHB11-201ENST00000354757 TNFRSF14Q92956 283 aa10.01□□□□□ -0.81
PCDHB11-201ENST00000354757 SNHG12Q9BXW3 62 aa10.01□□□□□ -0.81
PCDHB11-201ENST00000354757 CHD3Q12873 2000 aaKnown RBP10.01□□□□□ -0.81
PCDHB11-201ENST00000354757 TRAV30A0A087WSZ9 112 aa10.01□□□□□ -0.81
PCDHB11-201ENST00000354757 PRR31Q5SQ13 230 aa10.01□□□□□ -0.81
PCDHB11-201ENST00000354757 TMEM14EPQ6UXP3 125 aa10.01□□□□□ -0.81
PCDHB11-201ENST00000354757 RNASEH2CQ8TDP1 164 aaKnown RBP10.01□□□□□ -0.81
PCDHB11-201ENST00000354757 SRRM4A7MD48 611 aaKnown RBP10□□□□□ -0.81
PCDHB11-201ENST00000354757 HIST1H1EP10412 219 aaKnown RBP10□□□□□ -0.81
PCDHB11-201ENST00000354757 RPL23P62829 140 aaKnown RBP10□□□□□ -0.81
PCDHB11-201ENST00000354757 KRTAP27-1Q3LI81 207 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 SPSB3Q6PJ21 355 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 ITLN2Q8WWU7 325 aaPredicted RBP10□□□□□ -0.81
PCDHB11-201ENST00000354757 NUP210LQ5VU65 1888 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 TMEM167AQ8TBQ9 72 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 A0A1W2PPI3 338 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 DLEU1O43261 78 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 SPATA45Q537H7 98 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 Q5PR19 223 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 IL17RELQ6ZVW7 336 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 FA2HQ7L5A8 372 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 GLMPQ8WWB7 406 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 VENTXO95231 258 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 TMEM256Q8N2U0 113 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 WFDC12Q8WWY7 111 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 RNF125Q96EQ8 232 aa10□□□□□ -0.81
PCDHB11-201ENST00000354757 TRBV24-1A0A075B6N3 115 aa9.99□□□□□ -0.81
PCDHB11-201ENST00000354757 A0A1B0GUS0 222 aa9.99□□□□□ -0.81
PCDHB11-201ENST00000354757 PSG1P11464 419 aa9.99□□□□□ -0.81
PCDHB11-201ENST00000354757 HIST1H1AQ02539 215 aaPredicted RBP9.99□□□□□ -0.81
PCDHB11-201ENST00000354757 C3orf36Q3SXR2 165 aa9.99□□□□□ -0.81
PCDHB11-201ENST00000354757 TEX36Q5VZQ5 186 aa9.99□□□□□ -0.81
PCDHB11-201ENST00000354757 Q8NFD4 153 aa9.99□□□□□ -0.81
PCDHB11-201ENST00000354757 PGLYRP4Q96LB8 373 aa9.99□□□□□ -0.81
PCDHB11-201ENST00000354757 G3V318 75 aa9.99□□□□□ -0.81
PCDHB11-201ENST00000354757 RPL15P61313 204 aaKnown RBP9.99□□□□□ -0.81
PCDHB11-201ENST00000354757 MGST2Q99735 147 aa9.99□□□□□ -0.81
PCDHB11-201ENST00000354757 MSMBP08118 114 aa9.99□□□□□ -0.81
PCDHB11-201ENST00000354757 IFITM10A6NMD0 228 aa9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 MGPP08493 103 aa9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 PAX9P55771 341 aa9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 SPANXN1Q5VSR9 72 aa9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 TEX38Q6PEX7 206 aa9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 BEX4Q9NWD9 120 aaPredicted RBP9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 MUC3AQ02505 3323 aa9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 NPSP0C0P6 89 aa9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 ATP5IP56385 69 aaPredicted RBP9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 RELQ04864 619 aaPredicted RBP9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 IGFL4Q6B9Z1 124 aa9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 Q96MF0 132 aa9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 NEU1Q99519 415 aa9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 AGMATQ9BSE5 352 aa9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 J3QKU1 62 aa9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 NDPQ00604 133 aa9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 MRPL18Q9H0U6 180 aaKnown RBP9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 ZNF257Q9Y2Q1 563 aa9.98□□□□□ -0.81
PCDHB11-201ENST00000354757 A0A1W2PS18 150 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 TCRBV4S1A1TA0A5B7 111 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 UTF1Q5T230 341 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 BEND2Q8NDZ0 799 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 TMEM170AQ8WVE7 144 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 DERL1Q9BUN8 251 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 SCRT1Q9BWW7 348 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 LOC389332A0A1B0GUA5 103 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 C19orf84I3L1E1 186 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 M0R1W7 72 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 OR10J6PQ8NGY7 276 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 ASCL2Q99929 193 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 MRPL32Q9BYC8 188 aaKnown RBP9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 NPFFR1Q9GZQ6 430 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 TMEM250H0YL14 139 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 TCTAP57738 103 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 ATG2AQ2TAZ0 1938 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 LCNL1Q6ZST4 164 aa9.97□□□□□ -0.81
PCDHB11-201ENST00000354757 TRAV41A0A0B4J266 112 aa9.96□□□□□ -0.81
PCDHB11-201ENST00000354757 PMS2P5A8MQ11 134 aa9.96□□□□□ -0.81
PCDHB11-201ENST00000354757 A8MWL6 223 aa9.96□□□□□ -0.81
PCDHB11-201ENST00000354757 RNASE2P10153 161 aaKnown RBP9.96□□□□□ -0.81
PCDHB11-201ENST00000354757 RNASE7Q9H1E1 156 aaKnown RBP9.96□□□□□ -0.81
PCDHB11-201ENST00000354757 IGHV4-61A0A0C4DH41 118 aa9.96□□□□□ -0.81
PCDHB11-201ENST00000354757 FAM90A2PQ658T7 463 aa9.96□□□□□ -0.81
PCDHB11-201ENST00000354757 PARD6GQ9BYG4 376 aaPredicted RBP9.96□□□□□ -0.81
PCDHB11-201ENST00000354757 HLA-DRB1P01911 266 aa9.96□□□□□ -0.82
PCDHB11-201ENST00000354757 IL15RAQ13261 267 aa9.96□□□□□ -0.82
PCDHB11-201ENST00000354757 GUSBP1Q15486 140 aa9.96□□□□□ -0.82
PCDHB11-201ENST00000354757 Q9H3A6 140 aa9.96□□□□□ -0.82
PCDHB11-201ENST00000354757 NACAE9PAV3 2078 aa9.96□□□□□ -0.82
PCDHB11-201ENST00000354757 TANC2Q9HCD6 1990 aa9.96□□□□□ -0.82
PCDHB11-201ENST00000354757 TMEM189A5PLL7 270 aa9.96□□□□□ -0.82
PCDHB11-201ENST00000354757 CA1P00915 261 aaPredicted RBP9.96□□□□□ -0.82
PCDHB11-201ENST00000354757 LHBP01229 141 aa9.96□□□□□ -0.82
PCDHB11-201ENST00000354757 FOXA3P55318 350 aaPredicted RBP9.96□□□□□ -0.82
PCDHB11-201ENST00000354757 CDSNQ15517 529 aa9.96□□□□□ -0.82
PCDHB11-201ENST00000354757 EBLN2Q6P2I7 272 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms