RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 GPX1P07203 203 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 CRYGBP07316 175 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 MYOD1P15172 320 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 IER3P46695 156 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 NUTF2P61970 127 aaKnown RBP8.63□□□□□ -1.03
RTN3-201ENST00000338850 WT1-ASQ06250 92 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 ZNF329Q86UD4 541 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 TGIF2LXQ8IUE1 241 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 MAPK1IP1LQ8NDC0 245 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 DEFB108BQ8NET1 73 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 FXYD5Q96DB9 178 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 ZNF355PQ9NSJ1 428 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 NAT8BQ9UHF3 227 aa8.63□□□□□ -1.03
RTN3-201ENST00000338850 NUPR1O60356 82 aa8.62□□□□□ -1.03
RTN3-201ENST00000338850 FCN3O75636 299 aa8.62□□□□□ -1.03
RTN3-201ENST00000338850 HIST1H1EP10412 219 aaKnown RBP8.62□□□□□ -1.03
RTN3-201ENST00000338850 SUMO1P63165 101 aaKnown RBP8.62□□□□□ -1.03
RTN3-201ENST00000338850 MRGPRG-AS1Q2M3A8 158 aa8.62□□□□□ -1.03
RTN3-201ENST00000338850 MOB3BQ86TA1 216 aa8.62□□□□□ -1.03
RTN3-201ENST00000338850 BAGE3Q86Y29 109 aa8.62□□□□□ -1.03
RTN3-201ENST00000338850 BAGE2Q86Y30 109 aa8.62□□□□□ -1.03
RTN3-201ENST00000338850 C8orf46Q8TAG6 207 aa8.62□□□□□ -1.03
RTN3-201ENST00000338850 TBX15Q96SF7 602 aa8.62□□□□□ -1.03
RTN3-201ENST00000338850 MIEN1Q9BRT3 115 aa8.62□□□□□ -1.03
RTN3-201ENST00000338850 GFRA4Q9GZZ7 299 aa8.62□□□□□ -1.03
RTN3-201ENST00000338850 FNDC4Q9H6D8 234 aaPredicted RBP8.62□□□□□ -1.03
RTN3-201ENST00000338850 GNB4Q9HAV0 340 aa8.62□□□□□ -1.03
RTN3-201ENST00000338850 TMEM14CQ9P0S9 112 aa8.62□□□□□ -1.03
RTN3-201ENST00000338850 A0A1B0GV90 55 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 A0A1W2PPI3 338 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 IGLC7A0M8Q6 106 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 C20orf202A1L168 122 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 E7EQL1 145 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 BMPR1BO00238 502 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 ZNF253O75346 499 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 CRLF1O75462 422 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 IGHV1-8P0DP01 117 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 CCL3L1P16619 93 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 OR5I1Q13606 314 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 USF2Q15853 346 aaPredicted RBP8.61□□□□□ -1.03
RTN3-201ENST00000338850 C11orf71Q6IPW1 123 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 PATE2Q6UY27 113 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 SIGLECL1Q8N7X8 197 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 C5orf17Q8NAS9 161 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 OR10W1Q8NGF6 305 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 TSKUQ8WUA8 353 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 MISP3Q96FF7 219 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 FMC1Q96HJ9 113 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 MDFIQ99750 246 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 TMEM133Q9H2Q1 129 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 ZNF331Q9NQX6 463 aaPredicted RBP8.61□□□□□ -1.03
RTN3-201ENST00000338850 ABCA1O95477 2261 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 STAB1Q9NY15 2570 aa8.61□□□□□ -1.03
RTN3-201ENST00000338850 A0A1B0GXF2 115 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 GRIFINA4D1Z8 144 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 B9A039 149 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 ZNF324O75467 553 aaPredicted RBP8.6□□□□□ -1.03
RTN3-201ENST00000338850 TOMM40O96008 361 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 IGLV1-47P01700 117 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 RPL27AP46776 148 aaKnown RBP8.6□□□□□ -1.03
RTN3-201ENST00000338850 CCL8P80075 99 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 NEU1Q99519 415 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 HSPB9Q9BQS6 159 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 ATG101Q9BSB4 218 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 VAMP8Q9BV40 100 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 MLST8Q9BVC4 326 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 SNHG12Q9BXW3 62 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 SAMD10Q9BYL1 202 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 PRSS22Q9GZN4 317 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 RNASE7Q9H1E1 156 aaKnown RBP8.6□□□□□ -1.03
RTN3-201ENST00000338850 CBLN4Q9NTU7 201 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 DCAF16Q9NXF7 216 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 C1RLQ9NZP8 487 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 CTSZQ9UBR2 303 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 RNF24Q9Y225 148 aa8.6□□□□□ -1.03
RTN3-201ENST00000338850 FBN3Q75N90 2809 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 IGHV4-30-2A0A087WSY4 118 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 A0A096LNT2 108 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 ZNF705FA8MVS1 300 aaPredicted RBP8.59□□□□□ -1.03
RTN3-201ENST00000338850 EREGO14944 169 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 CD5LO43866 347 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 APCSP02743 223 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 ZNF705DP0CH99 300 aaPredicted RBP8.59□□□□□ -1.03
RTN3-201ENST00000338850 ZNF705BP0CI00 300 aaPredicted RBP8.59□□□□□ -1.03
RTN3-201ENST00000338850 HNF1AP20823 631 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 CTRLP40313 264 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 PRRX1P54821 245 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 PMCHL1Q16048 86 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 C11orf42Q8N5U0 333 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 Q8N976 141 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 OR2T6Q8NHC8 308 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 NPIPB3Q92617 1050 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 GPR82Q96P67 336 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 TNFRSF19Q9NS68 423 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 EPDR1Q9UM22 224 aa8.59□□□□□ -1.03
RTN3-201ENST00000338850 F11RQ9Y624 299 aaKnown RBP8.59□□□□□ -1.03
RTN3-201ENST00000338850 ANK3Q12955 4377 aaKnown RBP8.59□□□□□ -1.03
RTN3-201ENST00000338850 FBN1P35555 2871 aaKnown RBP8.59□□□□□ -1.04
RTN3-201ENST00000338850 MXRA5Q9NR99 2828 aa8.58□□□□□ -1.04
RTN3-201ENST00000338850 CR1P17927 2039 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms