RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 MBD3L3A6NE82 208 aaPredicted RBP13.76□□□□□ -0.21
PDS5A-201ENST00000303538 MBD3L5A6NJ08 208 aaPredicted RBP13.76□□□□□ -0.21
PDS5A-201ENST00000303538 DEFB131AP59861 70 aa13.76□□□□□ -0.21
PDS5A-201ENST00000303538 MBD3L2Q8NHZ7 208 aaPredicted RBP13.76□□□□□ -0.21
PDS5A-201ENST00000303538 ANAPC10Q9UM13 185 aa13.76□□□□□ -0.21
PDS5A-201ENST00000303538 EFNB3Q15768 340 aa13.76□□□□□ -0.21
PDS5A-201ENST00000303538 DAD1P61803 113 aa13.76□□□□□ -0.21
PDS5A-201ENST00000303538 GREB1Q4ZG55 1949 aa13.76□□□□□ -0.21
PDS5A-201ENST00000303538 A0A087WWL8 130 aa13.76□□□□□ -0.21
PDS5A-201ENST00000303538 SLC25A16P16260 332 aa13.76□□□□□ -0.21
PDS5A-201ENST00000303538 ADMP35318 185 aa13.76□□□□□ -0.21
PDS5A-201ENST00000303538 RPUSD1Q9UJJ7 312 aaKnown RBP13.76□□□□□ -0.21
PDS5A-201ENST00000303538 IL18BPO95998 194 aa13.76□□□□□ -0.21
PDS5A-201ENST00000303538 FNDC4Q9H6D8 234 aaPredicted RBP13.76□□□□□ -0.21
PDS5A-201ENST00000303538 COL24A1Q17RW2 1714 aa13.76□□□□□ -0.21
PDS5A-201ENST00000303538 EREGO14944 169 aa13.76□□□□□ -0.21
PDS5A-201ENST00000303538 SPSB3Q6PJ21 355 aa13.76□□□□□ -0.21
PDS5A-201ENST00000303538 ZNF407Q9C0G0 2248 aa13.76□□□□□ -0.21
PDS5A-201ENST00000303538 WDR90Q96KV7 1748 aa13.75□□□□□ -0.21
PDS5A-201ENST00000303538 TRBV7-1A0A0A6YYK4 115 aa13.75□□□□□ -0.21
PDS5A-201ENST00000303538 SRP19P09132 144 aaKnown RBP13.75□□□□□ -0.21
PDS5A-201ENST00000303538 LYPD2Q6UXB3 125 aa13.75□□□□□ -0.21
PDS5A-201ENST00000303538 ZNF48Q96MX3 618 aaPredicted RBP13.75□□□□□ -0.21
PDS5A-201ENST00000303538 MSRB2Q9Y3D2 182 aa13.75□□□□□ -0.21
PDS5A-201ENST00000303538 SPTAN1Q13813 2472 aaKnown RBP13.75□□□□□ -0.21
PDS5A-201ENST00000303538 A0A087WV48 116 aa13.75□□□□□ -0.21
PDS5A-201ENST00000303538 TCRAP04437 139 aa13.75□□□□□ -0.21
PDS5A-201ENST00000303538 SSBP2P81877 361 aaPredicted RBP13.75□□□□□ -0.21
PDS5A-201ENST00000303538 MINOS1Q5TGZ0 78 aa13.75□□□□□ -0.21
PDS5A-201ENST00000303538 MINOS1-NBL1R4GNA1 71 aa13.75□□□□□ -0.21
PDS5A-201ENST00000303538 TNFRSF14Q92956 283 aa13.75□□□□□ -0.21
PDS5A-201ENST00000303538 ZMAT4Q9H898 229 aa13.75□□□□□ -0.21
PDS5A-201ENST00000303538 F2Z2F3 143 aa13.75□□□□□ -0.21
PDS5A-201ENST00000303538 IGKCP01834 107 aa13.75□□□□□ -0.21
PDS5A-201ENST00000303538 CCL20P78556 96 aa13.74□□□□□ -0.21
PDS5A-201ENST00000303538 ZNF319Q9P2F9 582 aa13.74□□□□□ -0.21
PDS5A-201ENST00000303538 IGHV3-16A0A0C4DH30 117 aa13.74□□□□□ -0.21
PDS5A-201ENST00000303538 SIPA1L3O60292 1781 aaPredicted RBP13.74□□□□□ -0.21
PDS5A-201ENST00000303538 E9PQ18 207 aa13.74□□□□□ -0.21
PDS5A-201ENST00000303538 KNCNA6PVL3 124 aa13.74□□□□□ -0.21
PDS5A-201ENST00000303538 SERF1AO75920 110 aa13.74□□□□□ -0.21
PDS5A-201ENST00000303538 RPL23P62829 140 aaKnown RBP13.74□□□□□ -0.21
PDS5A-201ENST00000303538 SS18Q15532 418 aa13.74□□□□□ -0.21
PDS5A-201ENST00000303538 RHPN1-AS1Q9BWJ2 59 aa13.74□□□□□ -0.21
PDS5A-201ENST00000303538 SHISA3A0PJX4 238 aa13.74□□□□□ -0.21
PDS5A-201ENST00000303538 TEX43Q6ZNM6 134 aa13.74□□□□□ -0.21
PDS5A-201ENST00000303538 C1orf122Q6ZSJ8 110 aa13.74□□□□□ -0.21
PDS5A-201ENST00000303538 IGKV1-9A0A0C4DH69 117 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 ATP5L2Q7Z4Y8 100 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 C18orf12Q96KH6 178 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 OVOL3O00110 214 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 LAGE3Q14657 143 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 C1QL4Q86Z23 238 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 MS4A6AQ9H2W1 248 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 PKDREJQ9NTG1 2253 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 DOCK4Q8N1I0 1966 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 BUB1B-PAK6H3BSN5 160 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 C5orf64Q2M2E5 130 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 SUMO4Q6EEV6 95 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 F8VVB4 439 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 F8VWA3 439 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 LINC00271P0C7V0 271 aa13.73□□□□□ -0.21
PDS5A-201ENST00000303538 C14orf178Q8N769 122 aaPredicted RBP13.73□□□□□ -0.21
PDS5A-201ENST00000303538 ZNF561-AS1K7EIQ3 104 aa13.72□□□□□ -0.21
PDS5A-201ENST00000303538 CD177Q8N6Q3 437 aa13.72□□□□□ -0.21
PDS5A-201ENST00000303538 MSMBP08118 114 aa13.72□□□□□ -0.21
PDS5A-201ENST00000303538 HEPN1Q6WQI6 88 aa13.72□□□□□ -0.21
PDS5A-201ENST00000303538 GGNQ86UU5 652 aa13.72□□□□□ -0.21
PDS5A-201ENST00000303538 NRN1Q9NPD7 142 aa13.72□□□□□ -0.21
PDS5A-201ENST00000303538 ANXA2RQ3ZCQ2 193 aa13.72□□□□□ -0.21
PDS5A-201ENST00000303538 DMRTC2Q8IXT2 367 aaPredicted RBP13.72□□□□□ -0.21
PDS5A-201ENST00000303538 OCC1Q8TAD7 63 aa13.72□□□□□ -0.21
PDS5A-201ENST00000303538 LINC00477Q96M19 166 aa13.71□□□□□ -0.21
PDS5A-201ENST00000303538 TCF15Q12870 199 aa13.71□□□□□ -0.21
PDS5A-201ENST00000303538 DLX4Q92988 240 aaPredicted RBP13.71□□□□□ -0.21
PDS5A-201ENST00000303538 ZNF138P52744 262 aa13.71□□□□□ -0.21
PDS5A-201ENST00000303538 A0A096LPF7 62 aa13.71□□□□□ -0.22
PDS5A-201ENST00000303538 TRAV3A0A0B4J244 114 aa13.71□□□□□ -0.22
PDS5A-201ENST00000303538 TRAV8-4A0A0B4J246 113 aa13.71□□□□□ -0.22
PDS5A-201ENST00000303538 SRRM5B3KS81 715 aa13.71□□□□□ -0.22
PDS5A-201ENST00000303538 NIT1Q86X76 327 aa13.71□□□□□ -0.22
PDS5A-201ENST00000303538 DERL1Q9BUN8 251 aa13.71□□□□□ -0.22
PDS5A-201ENST00000303538 BRCA1P38398 1863 aaKnown RBP13.71□□□□□ -0.22
PDS5A-201ENST00000303538 NHLRC3Q5JS37 347 aa13.71□□□□□ -0.22
PDS5A-201ENST00000303538 LRRC37AA6NMS7 1700 aa13.71□□□□□ -0.22
PDS5A-201ENST00000303538 SPATA31B1PQ5VZV4 182 aa13.7□□□□□ -0.22
PDS5A-201ENST00000303538 LCN12Q6JVE5 192 aa13.7□□□□□ -0.22
PDS5A-201ENST00000303538 SBF2Q86WG5 1849 aa13.7□□□□□ -0.22
PDS5A-201ENST00000303538 USMG5Q96IX5 58 aa13.7□□□□□ -0.22
PDS5A-201ENST00000303538 ERG28Q9UKR5 140 aa13.7□□□□□ -0.22
PDS5A-201ENST00000303538 PLCE1Q9P212 2302 aa13.7□□□□□ -0.22
PDS5A-201ENST00000303538 TNFSF13O75888 250 aa13.7□□□□□ -0.22
PDS5A-201ENST00000303538 MST1P26927 711 aa13.7□□□□□ -0.22
PDS5A-201ENST00000303538 NEUROG3Q9Y4Z2 214 aa13.7□□□□□ -0.22
PDS5A-201ENST00000303538 CD5P06127 495 aa13.7□□□□□ -0.22
PDS5A-201ENST00000303538 NABP1Q96AH0 204 aa13.7□□□□□ -0.22
PDS5A-201ENST00000303538 MEGF9Q9H1U4 602 aa13.7□□□□□ -0.22
PDS5A-201ENST00000303538 DKK1O94907 266 aa13.7□□□□□ -0.22
PDS5A-201ENST00000303538 IFI27L1Q96BM0 104 aa13.7□□□□□ -0.22
PDS5A-201ENST00000303538 TMEM126AQ9H061 195 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms