RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 DNAL4O96015 105 aa10.85□□□□□ -0.67
SMG9-201ENST00000270066 IGKV1-5P01602 117 aa10.85□□□□□ -0.67
SMG9-201ENST00000270066 C9orf139Q6ZV77 190 aa10.85□□□□□ -0.67
SMG9-201ENST00000270066 TRBV24-1A0A075B6N3 115 aa10.85□□□□□ -0.67
SMG9-201ENST00000270066 CEACAM8P31997 349 aaPredicted RBP10.85□□□□□ -0.67
SMG9-201ENST00000270066 PIP4P1Q86T03 277 aa10.85□□□□□ -0.67
SMG9-201ENST00000270066 DTX1Q86Y01 620 aa10.85□□□□□ -0.67
SMG9-201ENST00000270066 Q8TCH9 128 aa10.85□□□□□ -0.67
SMG9-201ENST00000270066 KIF26BQ2KJY2 2108 aa10.85□□□□□ -0.67
SMG9-201ENST00000270066 TSPAN13O95857 204 aa10.85□□□□□ -0.67
SMG9-201ENST00000270066 STAG3L3P0CL85 134 aa10.85□□□□□ -0.67
SMG9-201ENST00000270066 ZNF664Q8N3J9 261 aa10.85□□□□□ -0.67
SMG9-201ENST00000270066 EREGO14944 169 aa10.84□□□□□ -0.67
SMG9-201ENST00000270066 MSMBP08118 114 aa10.84□□□□□ -0.67
SMG9-201ENST00000270066 CD33P20138 364 aa10.84□□□□□ -0.67
SMG9-201ENST00000270066 SUPT4H1P63272 117 aaKnown RBP10.84□□□□□ -0.67
SMG9-201ENST00000270066 NAA38Q9BRA0 125 aaKnown RBP10.84□□□□□ -0.67
SMG9-201ENST00000270066 RNF114Q9Y508 228 aa10.84□□□□□ -0.67
SMG9-201ENST00000270066 C1orf194Q5T5A4 169 aa10.84□□□□□ -0.67
SMG9-201ENST00000270066 TMEM256Q8N2U0 113 aa10.84□□□□□ -0.67
SMG9-201ENST00000270066 NUDT11Q96G61 164 aa10.84□□□□□ -0.67
SMG9-201ENST00000270066 SRSF1Q07955 248 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMG9-201ENST00000270066 PIP4P2Q8N4L2 257 aa10.84□□□□□ -0.67
SMG9-201ENST00000270066 TRAV5A0A0B4J249 113 aa10.84□□□□□ -0.67
SMG9-201ENST00000270066 MALP21145 153 aa10.84□□□□□ -0.67
SMG9-201ENST00000270066 SAA4P35542 130 aa10.84□□□□□ -0.67
SMG9-201ENST00000270066 PRSS33Q8NF86 280 aa10.84□□□□□ -0.67
SMG9-201ENST00000270066 OCC1Q8TAD7 63 aa10.84□□□□□ -0.67
SMG9-201ENST00000270066 RNF166Q96A37 237 aaPredicted RBP10.84□□□□□ -0.67
SMG9-201ENST00000270066 CNTFRP26992 372 aa10.83□□□□□ -0.67
SMG9-201ENST00000270066 TMEM14EPQ6UXP3 125 aa10.83□□□□□ -0.67
SMG9-201ENST00000270066 BEND2Q8NDZ0 799 aa10.83□□□□□ -0.67
SMG9-201ENST00000270066 VCX2Q9H322 139 aa10.83□□□□□ -0.67
SMG9-201ENST00000270066 NXT2Q9NPJ8 142 aaKnown RBP10.83□□□□□ -0.67
SMG9-201ENST00000270066 TRAV3A0A0B4J244 114 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 LINC00473A8K010 186 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 RPL15P61313 204 aaKnown RBP10.83□□□□□ -0.68
SMG9-201ENST00000270066 C5orf30Q96GV9 206 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 TOMM7Q9P0U1 55 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 GATA4P43694 442 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 PRR31Q5SQ13 230 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 PMS2P5A8MQ11 134 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 APOMO95445 188 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 ERVK11-1P61568 191 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 MAJINQ3KP22 176 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 ORMDL2Q53FV1 153 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 TSKUQ8WUA8 353 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 SLX1AQ9BQ83 275 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 NHP2Q9NX24 153 aaKnown RBP10.83□□□□□ -0.68
SMG9-201ENST00000270066 UBE2E1P51965 193 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 MGST2Q99735 147 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 SCRT1Q9BWW7 348 aa10.83□□□□□ -0.68
SMG9-201ENST00000270066 FHL1Q13642 323 aa10.82□□□□□ -0.68
SMG9-201ENST00000270066 PROK2Q9HC23 129 aa10.82□□□□□ -0.68
SMG9-201ENST00000270066 LINC01549A6NIU2 74 aa10.82□□□□□ -0.68
SMG9-201ENST00000270066 RNF223E7ERA6 249 aa10.82□□□□□ -0.68
SMG9-201ENST00000270066 LY6HO94772 140 aa10.82□□□□□ -0.68
SMG9-201ENST00000270066 FREM3P0C091 2139 aa10.82□□□□□ -0.68
SMG9-201ENST00000270066 ATP5L2Q7Z4Y8 100 aa10.82□□□□□ -0.68
SMG9-201ENST00000270066 KLHL30-AS1Q8NEE0 82 aa10.82□□□□□ -0.68
SMG9-201ENST00000270066 CYSLTR1Q9Y271 337 aa10.82□□□□□ -0.68
SMG9-201ENST00000270066 CRPP02741 224 aa10.82□□□□□ -0.68
SMG9-201ENST00000270066 LINC00614P0C842 121 aa10.82□□□□□ -0.68
SMG9-201ENST00000270066 TOMM40O96008 361 aa10.82□□□□□ -0.68
SMG9-201ENST00000270066 J3QKU1 62 aa10.81□□□□□ -0.68
SMG9-201ENST00000270066 PRADC1Q9BSG0 188 aa10.81□□□□□ -0.68
SMG9-201ENST00000270066 NLRC5Q86WI3 1866 aa10.81□□□□□ -0.68
SMG9-201ENST00000270066 IGKV2-40A0A087WW87 121 aaPredicted RBP10.81□□□□□ -0.68
SMG9-201ENST00000270066 TRAV1-1A0A0B4J248 108 aa10.81□□□□□ -0.68
SMG9-201ENST00000270066 IGKV2D-40P01614 121 aaPredicted RBP10.81□□□□□ -0.68
SMG9-201ENST00000270066 SIGMAR1Q99720 223 aa10.81□□□□□ -0.68
SMG9-201ENST00000270066 FNDC10F2Z333 226 aa10.81□□□□□ -0.68
SMG9-201ENST00000270066 LINC00477Q96M19 166 aa10.81□□□□□ -0.68
SMG9-201ENST00000270066 NCOR1P1Q9H4R4 102 aa10.81□□□□□ -0.68
SMG9-201ENST00000270066 TMEM242Q9NWH2 141 aa10.81□□□□□ -0.68
SMG9-201ENST00000270066 ZNF318Q5VUA4 2279 aa10.81□□□□□ -0.68
SMG9-201ENST00000270066 RNF144BQ7Z419 303 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 C10orf126Q8N4M7 172 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 FRMPD3Q5JV73 1810 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 PLXNA4Q9HCM2 1894 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 HBDP02042 147 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 ZNF138P52744 262 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 LCNL1Q6ZST4 164 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 C1QTNF4Q9BXJ3 329 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 GNB1LQ9BYB4 327 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 RBMY1BA6NDE4 496 aaKnown RBP10.8□□□□□ -0.68
SMG9-201ENST00000270066 RBMY1EA6NEQ0 496 aaKnown RBP10.8□□□□□ -0.68
SMG9-201ENST00000270066 NDUFA3O95167 84 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 RBMY1DP0C7P1 496 aaKnown RBP10.8□□□□□ -0.68
SMG9-201ENST00000270066 RBMY1A1P0DJD3 496 aaKnown RBP10.8□□□□□ -0.68
SMG9-201ENST00000270066 RBMY1CP0DJD4 496 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 GZMBP10144 247 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 RPRMLQ8N4K4 120 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 ZNF415Q09FC8 603 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 LYPD1Q8N2G4 141 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 OR2K2Q8NGT1 345 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 RCHY1Q96PM5 261 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 C9JQL5 133 aa10.8□□□□□ -0.68
SMG9-201ENST00000270066 KLF17Q5JT82 389 aaPredicted RBP10.8□□□□□ -0.68
SMG9-201ENST00000270066 SPATA31B1PQ5VZV4 182 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms