RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ZNF98A6NK75 572 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 FOXA3P55318 350 aaPredicted RBP11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 DEFB112Q30KQ8 113 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 PLXNA3P51805 1871 aa11.01□□□□□ -0.65
PDGFRB-201ENST00000261799 HIGD1CA8MV81 97 aa11.01□□□□□ -0.65
PDGFRB-201ENST00000261799 TMEM249Q2WGJ8 235 aa11.01□□□□□ -0.65
PDGFRB-201ENST00000261799 FAM120AOSQ5T036 256 aa11.01□□□□□ -0.65
PDGFRB-201ENST00000261799 MORN3Q6PF18 240 aaPredicted RBP11.01□□□□□ -0.65
PDGFRB-201ENST00000261799 PKIGQ9Y2B9 76 aa11.01□□□□□ -0.65
PDGFRB-201ENST00000261799 SLC17A3O00476 420 aa11□□□□□ -0.65
PDGFRB-201ENST00000261799 FGF16O43320 207 aa11□□□□□ -0.65
PDGFRB-201ENST00000261799 PSG3Q16557 428 aa11□□□□□ -0.65
PDGFRB-201ENST00000261799 ZNF876PQ49A33 203 aa11□□□□□ -0.65
PDGFRB-201ENST00000261799 TCTEX1D4Q5JR98 221 aa11□□□□□ -0.65
PDGFRB-201ENST00000261799 ITGB1BP1O14713 200 aa11□□□□□ -0.65
PDGFRB-201ENST00000261799 TRGC2P03986 189 aa11□□□□□ -0.65
PDGFRB-201ENST00000261799 MPZP25189 248 aa11□□□□□ -0.65
PDGFRB-201ENST00000261799 CCL20P78556 96 aa11□□□□□ -0.65
PDGFRB-201ENST00000261799 TEX36Q5VZQ5 186 aa11□□□□□ -0.65
PDGFRB-201ENST00000261799 RFNGQ9Y644 331 aa11□□□□□ -0.65
PDGFRB-201ENST00000261799 CCDC88CQ9P219 2028 aa11□□□□□ -0.65
PDGFRB-201ENST00000261799 TEX48A0A1B0GUV7 120 aa10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 NPIPB5A8MRT5 1133 aa10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 H3BUA1 57 aa10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 ZNF561-AS1K7EIQ3 104 aa10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 SRSF4Q08170 494 aaKnown RBP10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 LURAP1LQ8IV03 231 aa10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 TRAV5A0A0B4J249 113 aa10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 RASL10AQ92737 203 aa10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 SDHCQ99643 169 aaPredicted RBP10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 JPT2Q9H910 190 aa10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 HOXB4P17483 251 aaPredicted RBP10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 SHISA9B4DS77 424 aa10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 NDUFA4O00483 81 aa10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 SEC11AP67812 179 aa10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 DAZAP2Q15038 168 aaPredicted RBP10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 SPATA31B1PQ5VZV4 182 aa10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 CHTOPQ9Y3Y2 248 aaKnown RBP10.99□□□□□ -0.65
PDGFRB-201ENST00000261799 A0A087WV48 116 aa10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 CFHR3Q02985 330 aa10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 SIP14410 1827 aa10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 CCL24O00175 119 aa10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 LHBP01229 141 aa10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 BRWD1Q9NSI6 2320 aa10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 CBLN1P23435 193 aa10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 IGFL2Q6UWQ7 119 aa10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 LYPD1Q8N2G4 141 aa10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 MRPL27Q9P0M9 148 aaKnown RBP10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 NDUFB8O95169 186 aa10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 IGLV1-44P01699 117 aa10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 GFI1BQ5VTD9 330 aa10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 TEX43Q6ZNM6 134 aa10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 IFT22Q9H7X7 185 aa10.98□□□□□ -0.65
PDGFRB-201ENST00000261799 TRAV3A0A0B4J244 114 aa10.97□□□□□ -0.65
PDGFRB-201ENST00000261799 AZU1P20160 251 aa10.97□□□□□ -0.65
PDGFRB-201ENST00000261799 EVI2AP22794 236 aa10.97□□□□□ -0.65
PDGFRB-201ENST00000261799 DMRTA1Q5VZB9 504 aa10.97□□□□□ -0.65
PDGFRB-201ENST00000261799 TSPAN13O95857 204 aa10.97□□□□□ -0.65
PDGFRB-201ENST00000261799 TREML4Q6UXN2 200 aa10.97□□□□□ -0.65
PDGFRB-201ENST00000261799 K7EM74 188 aa10.97□□□□□ -0.65
PDGFRB-201ENST00000261799 IL17DQ8TAD2 202 aa10.97□□□□□ -0.65
PDGFRB-201ENST00000261799 NCOR1P1Q9H4R4 102 aa10.97□□□□□ -0.65
PDGFRB-201ENST00000261799 KLK5Q9Y337 293 aaPredicted RBP10.97□□□□□ -0.65
PDGFRB-201ENST00000261799 WDR83OSQ9Y284 106 aa10.97□□□□□ -0.65
PDGFRB-201ENST00000261799 SMIM13P0DJ93 91 aa10.96□□□□□ -0.65
PDGFRB-201ENST00000261799 EXOC3-AS1Q8N2X6 119 aa10.96□□□□□ -0.65
PDGFRB-201ENST00000261799 TTC9CQ8N5M4 171 aa10.96□□□□□ -0.65
PDGFRB-201ENST00000261799 MRPL16Q9NX20 251 aaKnown RBP10.96□□□□□ -0.65
PDGFRB-201ENST00000261799 IGHV4-30-2A0A087WSY4 118 aa10.96□□□□□ -0.65
PDGFRB-201ENST00000261799 F8VVB4 439 aa10.96□□□□□ -0.65
PDGFRB-201ENST00000261799 F8VWA3 439 aa10.96□□□□□ -0.65
PDGFRB-201ENST00000261799 ZNF833PQ6ZTB9 187 aa10.96□□□□□ -0.65
PDGFRB-201ENST00000261799 PROK2Q9HC23 129 aa10.96□□□□□ -0.65
PDGFRB-201ENST00000261799 LOXP28300 417 aaPredicted RBP10.96□□□□□ -0.66
PDGFRB-201ENST00000261799 GRNP28799 593 aaKnown RBP10.96□□□□□ -0.66
PDGFRB-201ENST00000261799 J3QRE1 110 aa10.96□□□□□ -0.66
PDGFRB-201ENST00000261799 ADORA2A-AS1P86434 159 aa10.96□□□□□ -0.66
PDGFRB-201ENST00000261799 C6orf226Q5I0X4 101 aa10.96□□□□□ -0.66
PDGFRB-201ENST00000261799 CACNA1CQ13936 2221 aa10.96□□□□□ -0.66
PDGFRB-201ENST00000261799 IGHV4-59P01825 116 aa10.96□□□□□ -0.66
PDGFRB-201ENST00000261799 VWC2Q2TAL6 325 aa10.96□□□□□ -0.66
PDGFRB-201ENST00000261799 GAGE10A6NGK3 116 aa10.95□□□□□ -0.66
PDGFRB-201ENST00000261799 G3V318 75 aa10.95□□□□□ -0.66
PDGFRB-201ENST00000261799 RHODO00212 210 aa10.95□□□□□ -0.66
PDGFRB-201ENST00000261799 PAX9P55771 341 aa10.95□□□□□ -0.66
PDGFRB-201ENST00000261799 SPTA1P02549 2419 aa10.95□□□□□ -0.66
PDGFRB-201ENST00000261799 SH2D1AO60880 128 aa10.95□□□□□ -0.66
PDGFRB-201ENST00000261799 NAPSAO96009 420 aa10.95□□□□□ -0.66
PDGFRB-201ENST00000261799 LAGE3Q14657 143 aa10.95□□□□□ -0.66
PDGFRB-201ENST00000261799 A0A087X0M5 115 aa10.95□□□□□ -0.66
PDGFRB-201ENST00000261799 A0A1B0GX30 115 aa10.95□□□□□ -0.66
PDGFRB-201ENST00000261799 RNASE7Q9H1E1 156 aaKnown RBP10.95□□□□□ -0.66
PDGFRB-201ENST00000261799 TRBV25-1A0A075B6N4 114 aa10.94□□□□□ -0.66
PDGFRB-201ENST00000261799 VCYO14598 125 aa10.94□□□□□ -0.66
PDGFRB-201ENST00000261799 WT1P19544 449 aaPredicted RBP10.94□□□□□ -0.66
PDGFRB-201ENST00000261799 UQCR10Q9UDW1 63 aa10.94□□□□□ -0.66
PDGFRB-201ENST00000261799 PIKFYVEQ9Y2I7 2098 aa10.94□□□□□ -0.66
PDGFRB-201ENST00000261799 GAGE12BA1L429 117 aa10.94□□□□□ -0.66
PDGFRB-201ENST00000261799 GAGE7O76087 117 aa10.94□□□□□ -0.66
PDGFRB-201ENST00000261799 GAGE12FP0CL80 117 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms