RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 CA1P00915 261 aaPredicted RBP7.1□□□□□ -1.27
PTCD3-201ENST00000254630 ZNF329Q86UD4 541 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 LHFPL1Q86WI0 220 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 LINC00158P58513 81 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 LINC01619G3V211 115 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 HOXA3O43365 443 aaPredicted RBP7.1□□□□□ -1.27
PTCD3-201ENST00000254630 PSCAO43653 123 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 IGKV1-5P01602 117 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 LCN12Q6JVE5 192 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 SRSF8Q9BRL6 282 aaKnown RBP7.1□□□□□ -1.27
PTCD3-201ENST00000254630 FGF16O43320 207 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 MSMBP08118 114 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 TDGF1P3P51864 188 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 QRFPP83859 136 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 LYZL1Q6UWQ5 148 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 SPCS1Q9Y6A9 102 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 LY6HO94772 140 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 GATA3P23771 443 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 C5orf24Q7Z6I8 188 aa7.1□□□□□ -1.27
PTCD3-201ENST00000254630 A0A1B0GWB2 263 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 NAPSAO96009 420 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 STAG3L3P0CL85 134 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 S100A7L2Q5SY68 101 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 OR2K2Q8NGT1 345 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 HGFACQ04756 655 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 FOXL1Q12952 345 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 CKAP5Q14008 2032 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 SRRM4A7MD48 611 aaKnown RBP7.09□□□□□ -1.27
PTCD3-201ENST00000254630 D6R8Y8 96 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 NPC2P61916 151 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 LY6G6EA0A0G2JKS1 128 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 A0A1B0GW64 132 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 TYMSP04818 313 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 C3orf56Q8N813 242 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 ZNF581Q9P0T4 197 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 U3KQA8 63 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 NCR2O95944 276 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 ERCC8Q13216 396 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 TMEM95Q3KNT9 176 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 KLF17Q5JT82 389 aaPredicted RBP7.09□□□□□ -1.27
PTCD3-201ENST00000254630 IGFL4Q6B9Z1 124 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 RNF144BQ7Z419 303 aa7.09□□□□□ -1.27
PTCD3-201ENST00000254630 KIAA0100Q14667 2235 aaKnown RBP7.09□□□□□ -1.27
PTCD3-201ENST00000254630 TCRAP04437 139 aa7.09□□□□□ -1.28
PTCD3-201ENST00000254630 NMSQ5H8A3 153 aa7.09□□□□□ -1.28
PTCD3-201ENST00000254630 UBE2E2Q96LR5 201 aa7.09□□□□□ -1.28
PTCD3-201ENST00000254630 RPL36AP83881 106 aaKnown RBP7.08□□□□□ -1.28
PTCD3-201ENST00000254630 RPL36ALQ969Q0 106 aaKnown RBP7.08□□□□□ -1.28
PTCD3-201ENST00000254630 C1QTNF4Q9BXJ3 329 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 IGHV2-70DA0A0C4DH43 119 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 LINC01549A6NIU2 74 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 RASL11AQ6T310 242 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 TMEM86BQ8N661 226 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 Q8TCH9 128 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 CYTL1Q9NRR1 136 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 RIPPLY3P57055 190 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 Q8TAT8 98 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 LSM4Q9Y4Z0 139 aaKnown RBP7.08□□□□□ -1.28
PTCD3-201ENST00000254630 TRAV8-4A0A0B4J246 113 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 NTF4P34130 210 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 UBE2E1P51965 193 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 MORN3Q6PF18 240 aaPredicted RBP7.08□□□□□ -1.28
PTCD3-201ENST00000254630 ATRAIDQ6UW56 229 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 TEX43Q6ZNM6 134 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 DEFB104AQ8WTQ1 72 aa7.08□□□□□ -1.28
PTCD3-201ENST00000254630 IGHV1-69DA0A0B4J2H0 117 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 IGHV1-69P01742 117 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 TMEM249Q2WGJ8 235 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 RHPN1-AS1Q9BWJ2 59 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 HELZP42694 1942 aaKnown RBP7.07□□□□□ -1.28
PTCD3-201ENST00000254630 Q6ZS49 121 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 FAM110DQ8TAY7 271 aaPredicted RBP7.07□□□□□ -1.28
PTCD3-201ENST00000254630 AGMATQ9BSE5 352 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 TRAV9-2A0A087WT02 112 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 RNASE2P10153 161 aaKnown RBP7.07□□□□□ -1.28
PTCD3-201ENST00000254630 TMEM14EPQ6UXP3 125 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 IL17RELQ6ZVW7 336 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 LYPD1Q8N2G4 141 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 RASL10AQ92737 203 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 C5orf30Q96GV9 206 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 PRDM13Q9H4Q3 707 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 M0R2P5 195 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 CD300EQ496F6 205 aaPredicted RBP7.07□□□□□ -1.28
PTCD3-201ENST00000254630 ZNF876PQ49A33 203 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 IFI27L1Q96BM0 104 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 DAZ1Q9NQZ3 744 aaKnown RBP7.07□□□□□ -1.28
PTCD3-201ENST00000254630 NHP2Q9NX24 153 aaKnown RBP7.07□□□□□ -1.28
PTCD3-201ENST00000254630 H3BUT2 72 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 SYNJ2BPP57105 145 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 LINC00205P59089 165 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 ZNF833PQ6ZTB9 187 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 CSTL1Q9H114 145 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 PTPRDP23468 1912 aa7.07□□□□□ -1.28
PTCD3-201ENST00000254630 MYO7AQ13402 2215 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 PDE4DIPQ5VU43 2346 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 A0A087WX48 190 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 ATP6V0E1O15342 81 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 PLNP26678 52 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 PRR31Q5SQ13 230 aa7.06□□□□□ -1.28
PTCD3-201ENST00000254630 GLRX5Q86SX6 157 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms