RNA–Protein interactions for RNA: ENST00000241051.7

DEPDC7-201, Transcript of DEP domain containing 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC7, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-201ENST00000241051 RNF2Q99496 336 aa11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 GNB4Q9HAV0 340 aa11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 FUT9Q9Y231 359 aa11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 WI2-2373I1.2A0A1W2PRP0 233 aa11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 C9JQL5 133 aa11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 RPLP1P05386 114 aaKnown RBP11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 ZNF343Q6P1L6 599 aa11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 MIR17HGQ75NE6 70 aa11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 C15orf54Q8N8G6 183 aa11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 ZNF491Q8N8L2 437 aa11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 RNF152Q8N8N0 203 aa11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 OR4X2Q8NGF9 303 aa11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 C16orf95Q9H693 158 aa11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 SMCO4Q9NRQ5 59 aa11.54□□□□□ -0.56
DEPDC7-201ENST00000241051 PPP5D1E7EU14 171 aa11.53□□□□□ -0.56
DEPDC7-201ENST00000241051 ZNF600Q6ZNG1 722 aa11.53□□□□□ -0.56
DEPDC7-201ENST00000241051 KLHDC1Q8N7A1 406 aa11.53□□□□□ -0.56
DEPDC7-201ENST00000241051 PBDC1Q9BVG4 233 aa11.53□□□□□ -0.56
DEPDC7-201ENST00000241051 SCRT1Q9BWW7 348 aa11.53□□□□□ -0.56
DEPDC7-201ENST00000241051 MRPL32Q9BYC8 188 aaKnown RBP11.53□□□□□ -0.56
DEPDC7-201ENST00000241051 IGHV3-35A0A0C4DH35 117 aa11.52□□□□□ -0.57
DEPDC7-201ENST00000241051 OR2C1O95371 312 aa11.52□□□□□ -0.57
DEPDC7-201ENST00000241051 IL4P05112 153 aa11.52□□□□□ -0.57
DEPDC7-201ENST00000241051 STAG3L2P0CL84 134 aa11.52□□□□□ -0.57
DEPDC7-201ENST00000241051 STAG3L3P0CL85 134 aa11.52□□□□□ -0.57
DEPDC7-201ENST00000241051 LINC00305Q7Z4B0 112 aa11.52□□□□□ -0.57
DEPDC7-201ENST00000241051 OR5AU1Q8NGC0 362 aa11.52□□□□□ -0.57
DEPDC7-201ENST00000241051 MYOZ3Q8TDC0 251 aa11.52□□□□□ -0.57
DEPDC7-201ENST00000241051 RNF125Q96EQ8 232 aa11.52□□□□□ -0.57
DEPDC7-201ENST00000241051 ZNF414Q96IQ9 312 aa11.52□□□□□ -0.57
DEPDC7-201ENST00000241051 UHRF2Q96PU4 802 aa11.52□□□□□ -0.57
DEPDC7-201ENST00000241051 HIGD1AQ9Y241 93 aa11.52□□□□□ -0.57
DEPDC7-201ENST00000241051 PUS1Q9Y606 427 aaKnown RBP eCLIP11.52□□□□□ -0.57
DEPDC7-201ENST00000241051 SETXQ7Z333 2677 aaKnown RBP11.52□□□□□ -0.57
DEPDC7-201ENST00000241051 TRBV12-3P01733 135 aa11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 ARL3P36405 182 aa11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 MORN5Q5VZ52 161 aa11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 TMPRSS5Q9H3S3 457 aa11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 TUBA4BQ9H853 241 aa11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 TECRQ9NZ01 308 aaKnown RBP11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 MRPL27Q9P0M9 148 aaKnown RBP11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 MTORP42345 2549 aa11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 TRAV5A0A0B4J249 113 aa11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 NDUFA7O95182 113 aa11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 CXorf1O96002 111 aa11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 C8orf88P0DMB2 117 aa11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 RPL35P42766 123 aaKnown RBP11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 S100A12P80511 92 aa11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 RELQ04864 619 aaPredicted RBP11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 RNF212Q495C1 297 aa11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 LINC01006Q8NI28 216 aa11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 OR5B12Q96R08 314 aa11.51□□□□□ -0.57
DEPDC7-201ENST00000241051 ARL14EPLP0DKL9 152 aa11.5□□□□□ -0.57
DEPDC7-201ENST00000241051 AKR1D1P51857 326 aa11.5□□□□□ -0.57
DEPDC7-201ENST00000241051 TAS2R45P59539 299 aa11.5□□□□□ -0.57
DEPDC7-201ENST00000241051 USF2Q15853 346 aaPredicted RBP11.5□□□□□ -0.57
DEPDC7-201ENST00000241051 FAM209BQ5JX69 171 aa11.5□□□□□ -0.57
DEPDC7-201ENST00000241051 TOMM20LQ6UXN7 152 aa11.5□□□□□ -0.57
DEPDC7-201ENST00000241051 C12orf57Q99622 126 aa11.5□□□□□ -0.57
DEPDC7-201ENST00000241051 PEF1Q9UBV8 284 aaKnown RBP11.5□□□□□ -0.57
DEPDC7-201ENST00000241051 RAB5BP61020 215 aa11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 GUK1Q16774 197 aa11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 KHDC3LQ587J8 217 aa11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 FAM167A-AS1Q96KT0 104 aa11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 UBE2E2Q96LR5 201 aa11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 SLC25A2Q9BXI2 301 aa11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 SLC25A39Q9BZJ4 359 aaPredicted RBP11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 GNG13Q9P2W3 67 aa11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 RBFOX3A6NFN3 312 aa11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 GCHFRP30047 84 aa11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 SRSF2Q01130 221 aaKnown RBP11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 PMS2P11Q13670 270 aa11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 HAGHQ16775 308 aa11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 WIPF2Q8TF74 440 aaPredicted RBP11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 HIST1H2BAQ96A08 127 aa11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 EIF5A2Q9GZV4 153 aaKnown RBP11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 ZFAND3Q9H8U3 227 aa11.49□□□□□ -0.57
DEPDC7-201ENST00000241051 FN1P02751 2386 aaKnown RBP11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 IGHV3OR16-8A0A075B7F1 116 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 BMPR1BO00238 502 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 OR7C2O60412 319 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 GGCTO75223 188 aaKnown RBP11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 MT-ND4LP03901 98 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 PSMB3P49720 205 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 MEOX2P50222 304 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 PPT1P50897 306 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 TCTEX1D4Q5JR98 221 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 PQLC2Q6ZP29 291 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 OR4F5Q8NH21 305 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 ZNF503Q96F45 646 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 RARRES2Q99969 163 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 SHANK2-AS3Q9BTD1 123 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 SMDT1Q9H4I9 107 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 RABAC1Q9UI14 185 aa11.48□□□□□ -0.57
DEPDC7-201ENST00000241051 LGALS1P09382 135 aaKnown RBP11.47□□□□□ -0.57
DEPDC7-201ENST00000241051 LEMD1Q68G75 181 aa11.47□□□□□ -0.57
DEPDC7-201ENST00000241051 S100A7AQ86SG5 101 aa11.47□□□□□ -0.57
DEPDC7-201ENST00000241051 PCP4L1A6NKN8 68 aa11.46□□□□□ -0.57
DEPDC7-201ENST00000241051 C1orf196B1AJZ1 125 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms