RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Gm20422E9PUR3 255 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 P18528 98 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Fgf14P70379 247 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gm7534Q3UU21 679 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Dll1Q61483 722 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Snrnp70Q62376 448 aaKnown RBP10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 AI987944Q7TPX5 406 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 NracQ8BNX7 165 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gm5447Q8BPB2 115 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Zfp87Q8K2A4 540 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Vmn1r70Q8R254 298 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Tctex1d2Q9CQ66 144 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Wnt16Q9QYS1 364 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Ighv1-16A0A075B5U1 98 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Ighv1-62-2A0A0A6YXZ4 119 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Trav13d-3J3QMG8 112 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Bcat2O35855 393 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Cryba1P02525 198 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Ifna5P07349 189 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 TymsP07607 307 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Cox5aP12787 146 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Ube2nP61089 152 aaKnown RBP10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Q24JP4 165 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Pmis2Q497Q9 96 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Grb2Q60631 217 aaKnown RBP10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Zc3h3Q8CHP0 950 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gltpd2Q8K0R6 321 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Vstm2aQ8R0A6 236 aa10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 ChtopQ9CY57 249 aaKnown RBP10.57□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gm21863J3KMP8 111 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Spam1P48794 512 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Vmn1r181Q0P547 304 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Oas1bQ60856 376 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Olfr1396Q7TQS8 315 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Plcxd3Q8BLJ3 321 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Q8C3M9 231 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Olfr1228Q8VGM9 323 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gm20815J3KMI0 227 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gm20914J3QME2 227 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gm20918J3QN17 227 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Bcl6bO88282 474 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Mtatp6P00848 226 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Cxcl1P12850 96 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Sftpa1P35242 248 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Rac1P63001 192 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Q3U595 105 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 IslrQ6GU68 428 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gm21292Q78EE2 227 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Tox4Q8BU11 619 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Olfr1512Q8VF72 313 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Reg4Q9D8G5 157 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Cldn14Q9Z0S3 239 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Zfp407G3UVV3 2246 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Pkd1l2Q7TN88 2461 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gm5819E9PZ96 154 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gm20821J3QPJ2 227 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gm5225J3QPL3 108 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Ypel5P62700 121 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Fbxw20Q5U467 468 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Olfr140Q60878 302 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 G0s2Q61585 103 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Zfp954Q7TNU5 416 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Tlcd2Q8VC26 310 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Olfr124Q8VGW6 315 aa10.56□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Eml5Q8BQM8 1977 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Zfp108E9Q8I5 642 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gm8653K9J7G2 307 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Olfr194L7N1Y8 306 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Olfr203L7N205 307 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Vmn1r117L7N2C9 307 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 P01658 132 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 P01803 113 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Cks2P56390 79 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Slc25a26Q5U680 274 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Tas2r120Q7M721 295 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Smim4Q8C1Q6 80 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Vash2Q8C5G2 355 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Vmn1r183Q8K3N5 305 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Olfr1202Q8VF98 309 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Olfr980Q8VH08 310 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 DnlzQ9D113 177 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Tmem54Q9D7S1 219 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Tbx21Q9JKD8 530 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Jbts17Q8CE72 3214 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Ctxnd1A0A1B0GST9 59 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Pwwp2bE9Q9M8 600 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Sfrp2P97299 295 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gm16686Q3UMN9 131 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Mtch1Q791T5 389 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Cdc34Q8CFI2 235 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Olfr1265Q8VEZ3 309 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Sfxn4Q925N1 313 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 CsQ9CZU6 464 aaKnown RBP10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Ighv5-12A0A075B5Q4 117 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gm44596A0A0N4SVA0 210 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Gm765B2RVL9 189 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Olfr869E9PX82 323 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 P01648 108 aa10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 Pdcd6P12815 191 aaKnown RBP10.55□□□□□ -0.72
Pcdh1-202ENSMUST00000159405 CortP56469 109 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms