RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 OcstampQ9D611 498 aa9.5□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Arpc1bQ9WV32 372 aaKnown RBP9.5□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Ccpg1osV9GXK1 122 aa9.5□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Olfr177E9Q7W1 309 aa9.49□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 AhsgP29699 345 aa9.49□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 KrasP32883 189 aa9.49□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Gng2P63213 71 aa9.49□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Slc35b1P97858 322 aa9.49□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Ccdc36Q6PDM4 574 aa9.49□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Dnd1Q6VY05 352 aa9.49□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Znrd1Q791N7 123 aa9.49□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 DpcdQ8BPA8 203 aa9.49□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Vmn1r36Q8R2E3 305 aa9.49□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 UrahQ9CRB3 118 aa9.49□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Sectm1bQ9JL59 212 aa9.49□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Ovol1Q9WTJ2 267 aa9.49□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Sumo3Q9Z172 110 aa9.49□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Ighv1-55A0A075B5W6 117 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Gm572B1ARY8 399 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Gm10521E9PZK0 135 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Gm2564F6Z9S8 108 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 GfyJ3KML8 504 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Rnf5O35445 180 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Ccl19O70460 108 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Fcer1gP20491 86 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Gnb4P29387 340 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 ClcP97400 68 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Kctd9Q80UN1 339 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Comtd1Q8BIG7 262 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Lsm11Q8BUV6 361 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Parp11Q8CFF0 331 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Lrrtm1Q8K377 522 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Dapk2Q8VDF3 370 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Rasl11bQ922H7 247 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Nudcd2Q9CQ48 157 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Ssbp2Q9CYZ8 361 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 MrapQ9D159 127 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Arpc1aQ9R0Q6 370 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Pf4Q9Z126 105 aa9.48□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Gm37388A0A0A6YY46 143 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Cd209gD3Z5D4 194 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Gsg1lD3Z7H4 322 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Olfr544E9PX47 334 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Olfr628K7N6B2 316 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Olfr1221L7MU53 311 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Olfr191L7N1Z8 309 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 DhodhO35435 395 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 GzmfP08883 248 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 CrpP14847 225 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Slc6a9P28571 692 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Chrna7P49582 502 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Ube2kP61087 200 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 SlbpP97440 275 aaKnown RBP9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Zfp974Q3UVF6 752 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Adgrg5Q3V3Z3 524 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Npy4rQ61041 375 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Cbx5Q61686 191 aaKnown RBP9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Megf10Q6DIB5 1147 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Sat2Q6P8J2 170 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Slc1a7Q8JZR4 559 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 RhovQ8VDU1 236 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Mrps23Q8VE22 177 aaKnown RBP9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Olfr135Q8VEY4 312 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Znf281Q99LI5 893 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Ucn2Q99ML8 113 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Ssr3Q9DCF9 185 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 DiabloQ9JIQ3 237 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 LitafQ9JLJ0 161 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Cxcl14Q9WUQ5 99 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 ApomQ9Z1R3 190 aa9.47□□□□□ -0.89
Ccdc28b-202ENSMUST00000106035 Ighv5-6A0A075B5Q0 117 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Fam136b-psA0A140T8T1 138 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Mfsd4b5E9PYY6 479 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Gm7233E9PZI8 198 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 P01658 132 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 CalrP14211 416 aaKnown RBP9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Hsf1P38532 525 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Gnb1P62874 340 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 AmbpQ07456 349 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Vmn1r15Q14C10 299 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Lhfpl5Q4KL25 219 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Ankrd13bQ5F259 626 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Ppp5cQ60676 499 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Vsig8Q6P3A4 417 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Olfr1000Q7TR99 314 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Gm9758Q80ZT2 255 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Olfr112Q8C0S2 320 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Iba57Q8CAK1 358 aaKnown RBP9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Cmc2Q8K199 79 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Olfr99Q8VFE4 305 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Lpcat3Q91V01 487 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Ms4a4dQ99N05 225 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Rer1Q9CQU3 196 aaKnown RBP9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Rps19Q9CZX8 145 aaKnown RBP9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Rhebl1Q9D8T3 184 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Ptges3lQ9D9A7 131 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 SrpxQ9R0M3 464 aa9.46□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Trbv29A0A0G2LB96 114 aa9.45□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Arl16B1ATY8 173 aa9.45□□□□□ -0.9
Ccdc28b-202ENSMUST00000106035 Slc25a17O70579 307 aa9.45□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms