RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Q9DAF8 208 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gdf15Q9Z0J7 303 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Cep192E9Q4Y4 2514 aaKnown RBP18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Myo18bE9PV66 2605 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr1274-psA0A1L1SQ02 309 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 RnlsA7RDN6 342 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr419E9Q0Y7 313 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Eid2bE9Q2Y0 151 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Prss32E9Q409 334 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr117L7N1Z1 317 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Dlx4P70436 240 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Foxf1Q61080 378 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Prickle3Q80VL3 624 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Dirc2Q8BFQ6 478 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 PhyhiplQ8BGT8 375 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Lpar6Q8BMC0 344 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 PurgQ8R4E6 350 aaKnown RBP18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr130Q8VFC1 317 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 NcmapQ99JS0 100 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Tmem33Q9CR67 247 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 ChodlQ9CXM0 273 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Clec6aQ9JKF4 209 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Wisp2Q9Z0G4 251 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 DeddQ9Z1L3 318 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Rpl23a-ps3A0A140T8M7 156 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gm2026A2ART4 498 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Npffr1E9Q468 432 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 G530012D18RikJ3QK25 139 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gm3633L7N233 213 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gm9611L7N476 213 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 P10404 641 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Lef1P27782 397 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Rpl23aP62751 156 aaKnown RBP18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Cacfd1Q8BG21 171 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Rab39bQ8BHC1 213 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Snx18Q91ZR2 614 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Arpc5Q9CPW4 151 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Q9CQ90 155 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Ing5Q9D8Y8 240 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Zfand6Q9DCH6 223 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr632Q9EPN9 317 aa18.67■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Cdc20bD3Z3I0 519 aa18.66■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gm6904E9PVF1 202 aa18.66■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gm10037E9PX85 104 aa18.66■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Nxph4G3X9N5 304 aa18.66■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Pitx3O35160 302 aa18.66■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Masp1P98064 704 aa18.66■□□□□ 0.58
Scn1b-201ENSMUST00000098548 MENTQ569E4 350 aa18.66■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Commd3Q63829 195 aa18.66■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr484Q8VFD3 321 aa18.66■□□□□ 0.58
Scn1b-201ENSMUST00000098548 St6galnac3Q9WUV2 305 aa18.66■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Ccl8Q9Z121 97 aa18.66■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Trav5-4A0A075B652 114 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Ighv5-2A0A0A6YVX8 117 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gm12790B1AUV6 201 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gm8265K7N6Y8 158 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Mcpt8P43430 247 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Q0VG49 157 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gm20816Q5FWD4 227 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Rnase12Q5GAM8 145 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Taar5Q5QD14 337 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr688Q6W049 321 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr901Q7TRD1 311 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr512Q8VFZ4 326 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Eif3fQ9DCH4 361 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Cbln3Q9JHG0 197 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 NagkQ9QZ08 343 aa18.65■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr1289A0A288CFY5 326 aa18.64■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gm14403A2BFU4 402 aa18.64■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gm21719J3KMI9 230 aa18.64■□□□□ 0.58
Scn1b-201ENSMUST00000098548 P01881 257 aa18.64■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Mtnd6P03925 172 aa18.64■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gfod1Q3UHD2 390 aa18.64■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Xaf1Q5NBU8 273 aa18.64■□□□□ 0.58
Scn1b-201ENSMUST00000098548 SspnQ62147 216 aa18.64■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Clec4a1Q80UI7 245 aa18.64■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Dmrtc2Q8CGW9 370 aa18.64■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Arpc5lQ9D898 153 aa18.64■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Svep1A2AVA0 3567 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Trav15-2-dv6-2A0A075B650 123 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Olfr1150-ps1A0A1L1STL1 316 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Zfp160E9Q459 650 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Rabl2E9Q9D5 223 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Olfr1053L7MU59 313 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Gm4778L7N229 365 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Hist1h1eP43274 219 aaKnown RBP18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Polr2gP62488 172 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Samd5Q3V1H9 173 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Olfr1299Q7TQX5 312 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Olfr736Q8VFT6 312 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Ndufb10Q9DCS9 176 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Dctn5Q9QZB9 182 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Psmb3Q9R1P1 205 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Slc22a5Q9Z0E8 557 aa18.64■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Olfr753-ps1A0A140LHN3 164 aa18.63■□□□□ 0.57
Scn1b-201ENSMUST00000098548 P04940 107 aa18.63■□□□□ 0.57
Scn1b-201ENSMUST00000098548 P04941 107 aa18.63■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Fbxw26Q8BI58 466 aa18.63■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Gm9913Q8BQQ2 135 aa18.63■□□□□ 0.57
Scn1b-201ENSMUST00000098548 Pttg1ipQ8R143 174 aa18.63■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms