RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CITED2Q99967 270 aaPredicted RBP7.27□□□□□ -1.25
HDAC9-229ENST00000622668 IFT22Q9H7X7 185 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 ITPR3Q14573 2671 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 C15orf65H3BRN8 121 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 PSG1P11464 419 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 CD81P60033 236 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 QRFPP83859 136 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 C1QL4Q86Z23 238 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 Q8N7P7 452 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 SYT8Q8NBV8 401 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 SGMS2Q8NHU3 365 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 ITGB1BP1O14713 200 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 FCN3O75636 299 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 FXYD7P58549 80 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 MUC21Q5SSG8 566 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 TNFSF18Q9UNG2 199 aa7.27□□□□□ -1.25
HDAC9-229ENST00000622668 A0A0B4J293 547 aa7.26□□□□□ -1.25
HDAC9-229ENST00000622668 OR11H7Q8NGC8 314 aa7.26□□□□□ -1.25
HDAC9-229ENST00000622668 CD5P06127 495 aa7.26□□□□□ -1.25
HDAC9-229ENST00000622668 ZNF343Q6P1L6 599 aa7.26□□□□□ -1.25
HDAC9-229ENST00000622668 ZNF833PQ6ZTB9 187 aa7.26□□□□□ -1.25
HDAC9-229ENST00000622668 BAGE3Q86Y29 109 aa7.26□□□□□ -1.25
HDAC9-229ENST00000622668 SIRPDQ9H106 197 aa7.26□□□□□ -1.25
HDAC9-229ENST00000622668 ZNF106Q9H2Y7 1883 aaKnown RBP7.26□□□□□ -1.25
HDAC9-229ENST00000622668 IGLV3-1P01715 115 aa7.26□□□□□ -1.25
HDAC9-229ENST00000622668 SHISA2Q6UWI4 295 aa7.26□□□□□ -1.25
HDAC9-229ENST00000622668 SVBPQ8N300 66 aa7.26□□□□□ -1.25
HDAC9-229ENST00000622668 TMEM262E9PQX1 116 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 TNFRSF13BO14836 293 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-229ENST00000622668 ARL14EPLP0DKL9 152 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 RNASE4P34096 147 aaKnown RBP7.25□□□□□ -1.25
HDAC9-229ENST00000622668 ST6GAL2Q96JF0 529 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 C1orf147Q96MC9 270 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-229ENST00000622668 PLXNB1O43157 2135 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 WIPF3A6NGB9 483 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 NAT1P18440 290 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 RELBQ01201 579 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 C19orf24Q9BVV8 132 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 MANBALQ9NQG1 85 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 SOX21Q9Y651 276 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-229ENST00000622668 ATG2AQ2TAZ0 1938 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 IGKV3OR2-268A0A0C4DH90 116 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 TMEM189A5PLL7 270 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 FABP9Q0Z7S8 132 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 MLANAQ16655 118 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 AMMECR1LQ6DCA0 310 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 TMEM88Q6PEY1 159 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 BTF3L4Q96K17 158 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 C1QTNF4Q9BXJ3 329 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 NKX6-2Q9C056 277 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-229ENST00000622668 MGAQ8IWI9 3026 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 NACAE9PAV3 2078 aa7.25□□□□□ -1.25
HDAC9-229ENST00000622668 MFSD2BA6NFX1 497 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 IGKV1-5P01602 117 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 HOXD3P31249 432 aaPredicted RBP7.24□□□□□ -1.25
HDAC9-229ENST00000622668 PMS2P11Q13670 270 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 SMUG1Q53HV7 270 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 C9orf66Q5T8R8 295 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 C19orf35Q6ZS72 473 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 ZNF439Q8NDP4 499 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 MRPL32Q9BYC8 188 aaKnown RBP7.24□□□□□ -1.25
HDAC9-229ENST00000622668 TMEM241Q24JQ0 296 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.24□□□□□ -1.25
HDAC9-229ENST00000622668 ST6GALNAC6Q969X2 333 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 NPCDR1Q9BY65 106 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 CDH23Q9H251 3354 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 CRLF1O75462 422 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 IFITM3Q01628 133 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 MBD6Q96DN6 1003 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 SLC50A1Q9BRV3 221 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 GGACTQ9BVM4 153 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 SRD5A3Q9H8P0 318 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 XCL2Q9UBD3 114 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 HMSDA8MTL9 139 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 SLURP1P55000 103 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 ZNF56Q15929 161 aa7.24□□□□□ -1.25
HDAC9-229ENST00000622668 COL6A3P12111 3177 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 M0R381 172 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 DEFB130BP0DP73 79 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 DEFB130AP0DP74 79 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 CRYBB3P26998 211 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 FCER1GP30273 86 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 IER3P46695 156 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 TMEM86BQ8N661 226 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 ZNF680Q8NEM1 530 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 GPR82Q96P67 336 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 FUT9Q9Y231 359 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 TRGV4A0A0C4DH28 118 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 CD7P09564 240 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 ZNF429Q86V71 674 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 TCTE3Q8IZS6 198 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 ADAMTS20P59510 1910 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 NTF3P20783 257 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 H2BFSP57053 126 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 C2orf83Q53S99 150 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 VAX2Q9UIW0 290 aa7.23□□□□□ -1.25
HDAC9-229ENST00000622668 PMS2P5A8MQ11 134 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 SEC11BP0C7V7 166 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 GP9P14770 177 aa7.22□□□□□ -1.25
HDAC9-229ENST00000622668 RBFOX3A6NFN3 312 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms