RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CTSDP07339 412 aaPredicted RBP6.7□□□□□ -1.34
GPC6-202ENST00000617456 SNRPBP14678 240 aaKnown RBP6.7□□□□□ -1.34
GPC6-202ENST00000617456 GNB3P16520 340 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 ATP6V0CP27449 155 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 TAS2R30P59541 319 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 PAFAH1B2P68402 229 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 IAH1Q2TAA2 248 aaPredicted RBP6.7□□□□□ -1.34
GPC6-202ENST00000617456 ANKRD55Q3KP44 614 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 ZFAND6Q6FIF0 208 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 ACSM6Q6P461 480 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 FOXI2Q6ZQN5 318 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 SLC25A48Q6ZT89 311 aaKnown RBP6.7□□□□□ -1.34
GPC6-202ENST00000617456 Q8N6K4 173 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 C5orf56Q8N8D9 126 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 C5orf17Q8NAS9 161 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 OR2T10Q8NGZ9 312 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 DERL3Q96Q80 235 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 P2RX4Q99571 388 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 PYGO2Q9BRQ0 406 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 GINS3Q9BRX5 216 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 CST11Q9H112 138 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 MBNL3Q9NUK0 354 aaKnown RBP6.7□□□□□ -1.34
GPC6-202ENST00000617456 SS18L2Q9UHA2 77 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 HSF4Q9ULV5 492 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 FUT9Q9Y231 359 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 MRPS28Q9Y2Q9 187 aaKnown RBP6.7□□□□□ -1.34
GPC6-202ENST00000617456 KIAA2026Q5HYC2 2103 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 DNAH1Q9P2D7 4330 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 TMEM235A6NFC5 223 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 CCL24O00175 119 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 SDCBPO00560 298 aaPredicted RBP6.69□□□□□ -1.34
GPC6-202ENST00000617456 HSPB6O14558 160 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 CNIH1O95406 144 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 CELP19835 753 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 CTRLP40313 264 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 S100A10P60903 97 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 RPS25P62851 125 aaKnown RBP6.69□□□□□ -1.34
GPC6-202ENST00000617456 TNP2Q05952 138 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 HSD52Q0P140 79 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 TDRG1Q3Y452 100 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 UFSP1Q6NVU6 142 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 GLIPR1L1Q6UWM5 242 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 FA2HQ7L5A8 372 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 ZNF695Q8IW36 515 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 SMIM20Q8N5G0 67 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 DRAM1Q8N682 238 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 RFESDQ8TAC1 157 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 Q8WTZ3 238 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 RTN4IP1Q8WWV3 396 aaPredicted RBP6.69□□□□□ -1.34
GPC6-202ENST00000617456 OR10C1Q96KK4 312 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 Q96M66 194 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 RCHY1Q96PM5 261 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 ABHD14AQ9BUJ0 271 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 ZNF471Q9BX82 626 aaPredicted RBP6.69□□□□□ -1.34
GPC6-202ENST00000617456 BANF2Q9H503 90 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 SRD5A3Q9H8P0 318 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 ZNF586Q9NXT0 402 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 SPANXCQ9NY87 97 aa6.69□□□□□ -1.34
GPC6-202ENST00000617456 A0A087WX48 190 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 IGLC7A0M8Q6 106 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 C12orf77C9JDV5 145 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 PDCD6O75340 191 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 NDUFB6O95139 128 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 MOSP00540 346 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 IFNA1P01562 189 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 IGKV1D-33P01593 117 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 IGKV1-33P01594 117 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 IGF1P05019 195 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 ELANEP08246 267 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 ELK1P19419 428 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 GNG4P50150 75 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 SULT1A2P50226 295 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 H2BFSP57053 126 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 HES1Q14469 280 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 MMDQ15546 238 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 DEFB136Q30KP8 78 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 C1orf100Q5SVJ3 147 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 C9orf66Q5T8R8 295 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 SBSPONQ8IVN8 264 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 OR8I2Q8N0Y5 310 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 ZFP41Q8N8Y5 198 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 ZNF439Q8NDP4 499 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 SLC25A21Q9BQT8 299 aaPredicted RBP6.68□□□□□ -1.34
GPC6-202ENST00000617456 CTDSP1Q9GZU7 261 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 KCNIP1Q9NZI2 227 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 HSPB8Q9UJY1 196 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 GPR132Q9UNW8 380 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 SORL1Q92673 2214 aa6.68□□□□□ -1.34
GPC6-202ENST00000617456 SMIM9A6NGZ8 99 aa6.67□□□□□ -1.34
GPC6-202ENST00000617456 C9JQL5 133 aa6.67□□□□□ -1.34
GPC6-202ENST00000617456 GABARAPH6UMI1 98 aa6.67□□□□□ -1.34
GPC6-202ENST00000617456 CXCL1P09341 107 aa6.67□□□□□ -1.34
GPC6-202ENST00000617456 FOXE3Q13461 319 aa6.67□□□□□ -1.34
GPC6-202ENST00000617456 GNMTQ14749 295 aa6.67□□□□□ -1.34
GPC6-202ENST00000617456 TNXAQ16473 311 aa6.67□□□□□ -1.34
GPC6-202ENST00000617456 ACOT6Q3I5F7 207 aaPredicted RBP6.67□□□□□ -1.34
GPC6-202ENST00000617456 UTF1Q5T230 341 aa6.67□□□□□ -1.34
GPC6-202ENST00000617456 MOB3BQ86TA1 216 aa6.67□□□□□ -1.34
GPC6-202ENST00000617456 FAM71E2Q8N5Q1 922 aa6.67□□□□□ -1.34
GPC6-202ENST00000617456 SMIM4Q8WVI0 70 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms