RNA–Protein interactions for RNA: ENST00000615676.1

YTHDF3-208, Transcript of YTH N6-methyladenosine RNA binding protein 3, human

TSL 1 (best)

Gene YTHDF3, Length 5,092 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YTHDF3-208	ENST00000615676	RASL11A	Q6T310	242 aa		11.23	□□□□□ -0.61
YTHDF3-208	ENST00000615676	CRIPAK	Q8N1N5	446 aa		11.23	□□□□□ -0.61
YTHDF3-208	ENST00000615676	DPH3P1	Q9H4G8	78 aa		11.23	□□□□□ -0.61
YTHDF3-208	ENST00000615676	LINC00527	Q9UJ94	153 aa		11.23	□□□□□ -0.61
YTHDF3-208	ENST00000615676	IGKV1D-8	A0A087WSZ0	117 aa		11.22	□□□□□ -0.61
YTHDF3-208	ENST00000615676	PMS2P5	A8MQ11	134 aa		11.22	□□□□□ -0.61
YTHDF3-208	ENST00000615676	ZNF138	P52744	262 aa		11.22	□□□□□ -0.61
YTHDF3-208	ENST00000615676	LINC00158	P58513	81 aa		11.22	□□□□□ -0.61
YTHDF3-208	ENST00000615676	C5orf64	Q2M2E5	130 aa		11.22	□□□□□ -0.61
YTHDF3-208	ENST00000615676	CLDN16	Q9Y5I7	305 aa		11.22	□□□□□ -0.61
YTHDF3-208	ENST00000615676	ZDBF2	Q9HCK1	2354 aa		11.22	□□□□□ -0.61
YTHDF3-208	ENST00000615676	TRAV1-1	A0A0B4J248	108 aa		11.22	□□□□□ -0.61
YTHDF3-208	ENST00000615676	IGHV4-39	P01824	125 aa		11.22	□□□□□ -0.61
YTHDF3-208	ENST00000615676	LHFPL1	Q86WI0	220 aa		11.22	□□□□□ -0.61
YTHDF3-208	ENST00000615676	NRXN2	Q9P2S2	1712 aa		11.22	□□□□□ -0.61
YTHDF3-208	ENST00000615676	TRAV12-3	A0A0B4J271	114 aa		11.22	□□□□□ -0.61
YTHDF3-208	ENST00000615676	ORAOV1	Q8WV07	137 aa		11.22	□□□□□ -0.61
YTHDF3-208	ENST00000615676	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	MBD3L3	A6NE82	208 aa	Predicted RBP	11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	EVI2A	P22794	236 aa		11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	ATXN8	Q156A1	80 aa		11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	RNF166	Q96A37	237 aa	Predicted RBP	11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	MS4A6A	Q9H2W1	248 aa		11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	GSN-AS1	Q9NRJ2	163 aa		11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	TRBV6-6	A0A0A6YYG2	114 aa		11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	FAM223B	A6NKX1	122 aa		11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676		H3BUX3	64 aa		11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	SRD5A1	P18405	259 aa		11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	FAM223A	Q8IWN6	122 aa		11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	PLEKHB2	Q96CS7	222 aa		11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	JPT2	Q9H910	190 aa		11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	WFDC1	Q9HC57	220 aa		11.21	□□□□□ -0.61
YTHDF3-208	ENST00000615676	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.21	□□□□□ -0.62
YTHDF3-208	ENST00000615676	TRAV5	A0A0B4J249	113 aa		11.21	□□□□□ -0.62
YTHDF3-208	ENST00000615676	DERL1	Q9BUN8	251 aa		11.21	□□□□□ -0.62
YTHDF3-208	ENST00000615676	EP300	Q09472	2414 aa	Predicted RBP	11.21	□□□□□ -0.62
YTHDF3-208	ENST00000615676	C10orf55	Q5SWW7	151 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	LYPD1	Q8N2G4	141 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	CST9L	Q9H4G1	147 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	RTTN	Q86VV8	2226 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	ESPL1	Q14674	2120 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676		M0R2P5	195 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	FOXG1	P55316	489 aa	Predicted RBP	11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	SRSF6	Q13247	344 aa	Known RBP	11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	CD177	Q8N6Q3	437 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	IGKV2D-40	P01614	121 aa	Predicted RBP	11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	TCRA	P04437	139 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	MST1	P26927	711 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	PCP4	P48539	62 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	HSD52	Q0P140	79 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	DMRTA1	Q5VZB9	504 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	TMEM219	Q86XT9	240 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	MDS2	Q8NDY4	140 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	TRBV24-1	A0A075B6N3	115 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	PSPN	O60542	156 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	RPL15	P61313	204 aa	Known RBP	11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	FOXL1	Q12952	345 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	NDUFAF3	Q9BU61	184 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	PIKFYVE	Q9Y2I7	2098 aa		11.2	□□□□□ -0.62
YTHDF3-208	ENST00000615676	GNLY	P22749	145 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	ZNF876P	Q49A33	203 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	RASL10A	Q92737	203 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	GFI1	Q99684	422 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	RNF114	Q9Y508	228 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676		A0A1B0GW64	132 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676		H0YJW9	148 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	CD300E	Q496F6	205 aa	Predicted RBP	11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	ERG28	Q9UKR5	140 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	BUB1B-PAK6	H3BSN5	160 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676		A0A0G2JNJ9	132 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	SRRM4	A7MD48	611 aa	Known RBP	11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	VCY	O14598	125 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	SELL	P14151	372 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	PIP4P2	Q8N4L2	257 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	SRSF8	Q9BRL6	282 aa	Known RBP	11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	SCRT1	Q9BWW7	348 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676		Q9UFV3	132 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	LY96	Q9Y6Y9	160 aa		11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676	INTS1	Q8N201	2190 aa	Known RBP	11.19	□□□□□ -0.62
YTHDF3-208	ENST00000615676		A0A087WV48	116 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	TRGV1	A0A0A0MS02	117 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676		A8MWV9	139 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	INS	P01308	110 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	C1QL4	Q86Z23	238 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	VSIR	Q9H7M9	311 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	MYOF	Q9NZM1	2061 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	KLRD1	Q13241	179 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	UNQ6494/PRO21346	Q6UXR6	183 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	TEX43	Q6ZNM6	134 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	RFNG	Q9Y644	331 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	IGKV1-27	A0A075B6S5	117 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	HIST1H2BK	O60814	126 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	HIST1H2BJ	P06899	126 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	HIST1H2BO	P23527	126 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	HIST1H2BB	P33778	126 aa		11.18	□□□□□ -0.62
YTHDF3-208	ENST00000615676	HIST1H2BD	P58876	126 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms