RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 FAM32AQ9Y421 112 aaKnown RBP0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 V9GYQ6 96 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 POLEQ07864 2286 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 CASP8AP2Q9UKL3 1982 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 KDM6AO15550 1401 aaPredicted RBP0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 TNS3Q68CZ2 1445 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 FREM3P0C091 2139 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 XIRP1Q702N8 1843 aaKnown RBP0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 MUC4Q99102 2169 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 PTPRDP23468 1912 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 DLG5Q8TDM6 1919 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 TRAV4A0A0B4J268 109 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 FAM236DA0A1B0GTK5 79 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 TMEM212A6NML5 194 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 ORC5O43913 435 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 MRPS14O60783 128 aaKnown RBP0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 PFDN1O60925 122 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 PIAS1O75925 651 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 OR2J2O76002 312 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 ATG12O94817 140 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 NDUFC2O95298 119 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 IFNA1P01562 189 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 OR4E1P0C645 316 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 FAM236CP0DP71 79 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 SPTBP11277 2137 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 CYBAP13498 195 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 MIFP14174 115 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 SPI1P17947 270 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 SRP14P37108 136 aaKnown RBP0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 TCTAP57738 103 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 RPS20P60866 119 aaKnown RBP0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 EIF5AP63241 154 aaKnown RBP0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 ZNF345Q14585 488 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 TSNQ15631 228 aaKnown RBP0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 NNATQ16517 81 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 ARHGAP11BQ3KRB8 267 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 LINC01554Q52M75 96 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 AKR1C8PQ5T2L2 129 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 LCN15Q6UWW0 184 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 C7orf65Q6ZTY9 151 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 LCA10Q71F78 164 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 FP248Q71RG6 208 aaPredicted RBP0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 OR2T10Q8NGZ9 312 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 CANT1Q8WVQ1 401 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 DNAJC9Q8WXX5 260 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 AP3S1Q92572 193 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 MALSU1Q96EH3 234 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 HIST1H2BLQ99880 126 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 PRRT1Q99946 306 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 C9orf16Q9BUW7 83 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 PBOV1Q9GZY1 135 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 SH3BGRL3Q9H299 93 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 C14orf132Q9NPU4 83 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 OSTCQ9NRP0 149 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 LYRM2Q9NU23 88 aaPredicted RBP0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 TAS2R4Q9NYW5 299 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 OPTCQ9UBM4 332 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 LAMTOR3Q9UHA4 124 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 BAIAP2Q9UQB8 552 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 LHFPL6Q9Y693 200 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 PBRM1Q86U86 1689 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 FER1L6Q2WGJ9 1857 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 ZNF469Q96JG9 3925 aaPredicted RBP0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 MIA2Q96PC5 1412 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 RIMBP3CA6NJZ7 1639 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 RIMBP3BA6NNM3 1639 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 RIMBP3Q9UFD9 1639 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 ASCC3Q8N3C0 2202 aaKnown RBP0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 MYH9P35579 1960 aaKnown RBP0.45□□□□□ -2.34
SMCHD1-206ENST00000581631 PEAK1Q9H792 1746 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 NISCHQ9Y2I1 1504 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 UNC13CQ8NB66 2214 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 KIAA1549LQ6ZVL6 1849 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 A8MWV9 139 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 G3V2T6 193 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 BUB1B-PAK6H3BSN5 160 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 H7C1C5 153 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 HMGB3O15347 200 aaKnown RBP0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 IFNA14P01570 189 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 CRPP02741 224 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 C1QBP02746 253 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 CLPSP04118 112 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 ASAH2BP0C7U1 165 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 PHBP35232 272 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 PIGPP57054 158 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 LCN6P62502 163 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 RHOBP62745 196 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 SUPT4H1P63272 117 aaKnown RBP0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 RHOGP84095 191 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 RUNX1Q01196 453 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 PLCXD2Q0VAA5 305 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 Q1T7F1 81 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 RRN3P1Q2M238 152 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 FAM173BQ6P4H8 233 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 C22orf39Q6P5X5 142 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 GRINAQ7Z429 371 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 STX12Q86Y82 276 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 CLVS1Q8IUQ0 354 aaPredicted RBP0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 IFT20Q8IY31 132 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms