RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 C19orf24Q9BVV8 132 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 FN1P02751 2386 aaKnown RBP8.13□□□□□ -1.11
SMG6-213ENST00000573166 CFAP54Q96N23 3096 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 CGB1A6NKQ9 187 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 HSBP1O75506 76 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 BSXQ3C1V8 233 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 C2orf83Q53S99 150 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 FAM120AOSQ5T036 256 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 EBLN2Q6P2I7 272 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 DPPA3Q6W0C5 159 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 ZNF738Q8NE65 137 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 SMDT1Q9H4I9 107 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 TRAPPC1Q9Y5R8 145 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 PCSK5Q92824 1860 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 PGPA6NDG6 321 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 B4DEV8 164 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 G3V318 75 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 HSPB1P04792 205 aaKnown RBP8.13□□□□□ -1.11
SMG6-213ENST00000573166 ZNF600Q6ZNG1 722 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 C8orf31Q8N9H6 132 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 HIST1H2BAQ96A08 127 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 PSMG3Q9BT73 122 aaPredicted RBP8.13□□□□□ -1.11
SMG6-213ENST00000573166 OR51M1Q9H341 326 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 CYTL1Q9NRR1 136 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 F11RQ9Y624 299 aaKnown RBP8.13□□□□□ -1.11
SMG6-213ENST00000573166 A0A1W2PPI3 338 aa8.12□□□□□ -1.11
SMG6-213ENST00000573166 A0A1W2PPR1 153 aa8.12□□□□□ -1.11
SMG6-213ENST00000573166 GBGT1Q8N5D6 347 aa8.12□□□□□ -1.11
SMG6-213ENST00000573166 CELSR3Q9NYQ7 3312 aa8.12□□□□□ -1.11
SMG6-213ENST00000573166 AMY1AP04745 511 aa8.12□□□□□ -1.11
SMG6-213ENST00000573166 PAX1P15863 534 aa8.12□□□□□ -1.11
SMG6-213ENST00000573166 KRTAP10-9P60411 292 aa8.12□□□□□ -1.11
SMG6-213ENST00000573166 KRTDAPP60985 99 aa8.12□□□□□ -1.11
SMG6-213ENST00000573166 OR4B1Q8NGF8 309 aa8.12□□□□□ -1.11
SMG6-213ENST00000573166 TPSG1Q9NRR2 321 aa8.12□□□□□ -1.11
SMG6-213ENST00000573166 ARL14EPLP0DKL9 152 aa8.12□□□□□ -1.11
SMG6-213ENST00000573166 PAX5Q02548 391 aa8.12□□□□□ -1.11
SMG6-213ENST00000573166 Q8N7P7 452 aa8.12□□□□□ -1.11
SMG6-213ENST00000573166 C3orf56Q8N813 242 aa8.12□□□□□ -1.11
SMG6-213ENST00000573166 HELTA6NFD8 242 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 DBX1A6NMT0 343 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 H0Y8G0 127 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 TCF21O43680 179 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 IGKV1-39P01597 117 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 IGKV1D-39P04432 117 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 PCP4P48539 62 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 PAX8Q06710 450 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 CRIP3Q6Q6R5 217 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 TOMM20LQ6UXN7 152 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 NOL4LQ96MY1 436 aaPredicted RBP8.11□□□□□ -1.11
SMG6-213ENST00000573166 SRRM4A7MD48 611 aaKnown RBP8.11□□□□□ -1.11
SMG6-213ENST00000573166 CHEK1O14757 476 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 PRSS57Q6UWY2 283 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 PIP4P2Q8N4L2 257 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 RNF125Q96EQ8 232 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 MRPL32Q9BYC8 188 aaKnown RBP8.11□□□□□ -1.11
SMG6-213ENST00000573166 REV3LO60673 3130 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 H3BQ15 152 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 ZNF841Q6ZN19 808 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 KLHL30-AS1Q8NEE0 82 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 OR10J6PQ8NGY7 276 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 VAMP8Q9BV40 100 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 PEMTQ9UBM1 199 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 VPREB3Q9UKI3 123 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 FAM181BA6NEQ2 426 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 PMS2P11Q13670 270 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 TMEM78Q5T7P6 136 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 NAT8Q9UHE5 227 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 WDR83OSQ9Y284 106 aa8.11□□□□□ -1.11
SMG6-213ENST00000573166 USP24Q9UPU5 2620 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 TCAPO15273 167 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 PLXNB1O43157 2135 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 FGF16O43320 207 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 SNRPD3P62318 126 aaKnown RBP8.1□□□□□ -1.11
SMG6-213ENST00000573166 PVRIGQ6DKI7 326 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 TMEM14BQ9NUH8 114 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 AKAP13Q12802 2813 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 A0A087X0M5 115 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 A0A1B0GX30 115 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 OVOL3O00110 214 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 IGLV1-47P01700 117 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 VAMP3Q15836 100 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 RCC1LQ96I51 464 aaKnown RBP8.1□□□□□ -1.11
SMG6-213ENST00000573166 SIRPDQ9H106 197 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 FUT9Q9Y231 359 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 A0A1B0GWJ7 208 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 GGCTO75223 188 aaKnown RBP8.1□□□□□ -1.11
SMG6-213ENST00000573166 NBEAP1P0C6P0 100 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 RNASE2P10153 161 aaKnown RBP8.1□□□□□ -1.11
SMG6-213ENST00000573166 BCL2P10415 239 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 RPL29P47914 159 aaKnown RBP8.1□□□□□ -1.11
SMG6-213ENST00000573166 MLANAQ16655 118 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 LCNL1Q6ZST4 164 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 CYB561D1Q8N8Q1 229 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 USMG5Q96IX5 58 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 GSX1Q9H4S2 264 aaPredicted RBP8.1□□□□□ -1.11
SMG6-213ENST00000573166 AURKAIP1Q9NWT8 199 aaPredicted RBP8.1□□□□□ -1.11
SMG6-213ENST00000573166 NAT8BQ9UHF3 227 aa8.1□□□□□ -1.11
SMG6-213ENST00000573166 PDE6DO43924 150 aa8.09□□□□□ -1.11
SMG6-213ENST00000573166 RNF224P0DH78 156 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms