RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 UFSP1Q6NVU6 142 aa12.46□□□□□ -0.42
SMG6-207ENST00000570756 PATE2Q6UY27 113 aa12.46□□□□□ -0.42
SMG6-207ENST00000570756 LINC00305Q7Z4B0 112 aa12.46□□□□□ -0.42
SMG6-207ENST00000570756 SPTBN4Q9H254 2564 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 SRRM4A7MD48 611 aaKnown RBP12.45□□□□□ -0.42
SMG6-207ENST00000570756 PPIAL4DF5H284 164 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 CECR9P0C854 216 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 SARAFQ96BY9 339 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 PERPQ96FX8 193 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 NDUFA4L2Q9NRX3 87 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 CHTOPQ9Y3Y2 248 aaKnown RBP12.45□□□□□ -0.42
SMG6-207ENST00000570756 INS-IGF2F8WCM5 200 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 H3BRM9 83 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 SAP30O75446 220 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 LTAP01374 205 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 CT45A6P0DMU7 189 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 CT45A5P0DMU8 189 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 CT45A7P0DMV0 189 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 C5orf17Q8NAS9 161 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 DPF1Q92782 380 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 SGK494Q96LW2 274 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 RPH3ALQ9UNE2 315 aa12.45□□□□□ -0.42
SMG6-207ENST00000570756 LAMA5O15230 3695 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 C9orf118A6NHY6 69 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 CIDEAO60543 219 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 FSTL3O95633 263 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 CD46P15529 392 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 CSN1S1P47710 185 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 SUB1P53999 127 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMG6-207ENST00000570756 PAX2Q02962 417 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 TMEM30BQ3MIR4 351 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 LINC00322Q6ZN03 302 aaPredicted RBP12.44□□□□□ -0.42
SMG6-207ENST00000570756 MDS2Q8NDY4 140 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 C1orf162Q8NEQ5 155 aaPredicted RBP12.44□□□□□ -0.42
SMG6-207ENST00000570756 OR1B1Q8NGR6 318 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 OSR1Q8TAX0 266 aaPredicted RBP12.44□□□□□ -0.42
SMG6-207ENST00000570756 BLNKQ8WV28 456 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 NPIPB3Q92617 1050 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 MCRIP2Q9BUT9 160 aaKnown RBP12.44□□□□□ -0.42
SMG6-207ENST00000570756 TMUB1Q9BVT8 246 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 AP5S1Q9NUS5 200 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 PCNX2A6NKB5 2137 aa12.44□□□□□ -0.42
SMG6-207ENST00000570756 G3V4G9 280 aa12.43□□□□□ -0.42
SMG6-207ENST00000570756 HAX1O00165 279 aa12.43□□□□□ -0.42
SMG6-207ENST00000570756 RIPPLY3P57055 190 aa12.43□□□□□ -0.42
SMG6-207ENST00000570756 CDX4O14627 284 aaPredicted RBP12.43□□□□□ -0.42
SMG6-207ENST00000570756 NBEAP1P0C6P0 100 aa12.43□□□□□ -0.42
SMG6-207ENST00000570756 ZNF138P52744 262 aa12.43□□□□□ -0.42
SMG6-207ENST00000570756 SSBP2P81877 361 aaPredicted RBP12.43□□□□□ -0.42
SMG6-207ENST00000570756 THAP8Q8NA92 274 aa12.43□□□□□ -0.42
SMG6-207ENST00000570756 FNDC4Q9H6D8 234 aaPredicted RBP12.43□□□□□ -0.42
SMG6-207ENST00000570756 KNTC1P50748 2209 aa12.43□□□□□ -0.42
SMG6-207ENST00000570756 CFAP47Q6ZTR5 3102 aa12.42□□□□□ -0.42
SMG6-207ENST00000570756 NEU4Q8WWR8 484 aaPredicted RBP12.42□□□□□ -0.42
SMG6-207ENST00000570756 TIMM8BQ9Y5J9 83 aaPredicted RBP12.42□□□□□ -0.42
SMG6-207ENST00000570756 K7EP34 96 aa12.42□□□□□ -0.42
SMG6-207ENST00000570756 PLAUP00749 431 aa12.42□□□□□ -0.42
SMG6-207ENST00000570756 SLC25A48Q6ZT89 311 aaKnown RBP12.42□□□□□ -0.42
SMG6-207ENST00000570756 OR10AG1Q8NH19 301 aa12.42□□□□□ -0.42
SMG6-207ENST00000570756 ITLN1Q8WWA0 313 aa12.42□□□□□ -0.42
SMG6-207ENST00000570756 HARBI1Q96MB7 349 aa12.42□□□□□ -0.42
SMG6-207ENST00000570756 ZNF747Q9BV97 191 aa12.42□□□□□ -0.42
SMG6-207ENST00000570756 DSCAML1Q8TD84 2053 aa12.42□□□□□ -0.42
SMG6-207ENST00000570756 NPIPB6E9PJ23 425 aa12.41□□□□□ -0.42
SMG6-207ENST00000570756 CSN3P07498 182 aa12.41□□□□□ -0.42
SMG6-207ENST00000570756 FAM87AP0C7U9 286 aa12.41□□□□□ -0.42
SMG6-207ENST00000570756 COL8A1P27658 744 aa12.41□□□□□ -0.42
SMG6-207ENST00000570756 MOGAT3Q86VF5 341 aa12.41□□□□□ -0.42
SMG6-207ENST00000570756 CNEP1R1Q8N9A8 125 aa12.41□□□□□ -0.42
SMG6-207ENST00000570756 SSUH2Q9Y2M2 353 aa12.41□□□□□ -0.42
SMG6-207ENST00000570756 IGKV1D-37A0A075B6S9 117 aa12.41□□□□□ -0.42
SMG6-207ENST00000570756 FA2HQ7L5A8 372 aa12.41□□□□□ -0.42
SMG6-207ENST00000570756 OR1N2Q8NGR9 330 aa12.41□□□□□ -0.42
SMG6-207ENST00000570756 TANC2Q9HCD6 1990 aa12.41□□□□□ -0.42
SMG6-207ENST00000570756 ZFHX4Q86UP3 3567 aa12.4□□□□□ -0.42
SMG6-207ENST00000570756 IGLV1-44P01699 117 aa12.4□□□□□ -0.42
SMG6-207ENST00000570756 APOHP02749 345 aaPredicted RBP12.4□□□□□ -0.42
SMG6-207ENST00000570756 TCRAP04437 139 aa12.4□□□□□ -0.42
SMG6-207ENST00000570756 UQCRFS1P47985 274 aa12.4□□□□□ -0.42
SMG6-207ENST00000570756 AKAP13Q12802 2813 aa12.4□□□□□ -0.42
SMG6-207ENST00000570756 SNAI2O43623 268 aa12.4□□□□□ -0.42
SMG6-207ENST00000570756 LHBP01229 141 aa12.4□□□□□ -0.42
SMG6-207ENST00000570756 TMEM11P17152 192 aa12.4□□□□□ -0.42
SMG6-207ENST00000570756 ORM2P19652 201 aa12.4□□□□□ -0.42
SMG6-207ENST00000570756 OR5AN1Q8NGI8 311 aa12.4□□□□□ -0.42
SMG6-207ENST00000570756 SPRY4Q9C004 299 aa12.4□□□□□ -0.42
SMG6-207ENST00000570756 H3BUT2 72 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 HSD52Q0P140 79 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 ASCL5Q7RTU5 278 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 ZCCHC24Q8N2G6 241 aaKnown RBP12.39□□□□□ -0.43
SMG6-207ENST00000570756 OR5A1Q8NGJ0 315 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 OR2K2Q8NGT1 345 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 OR4A5Q8NH83 315 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 VSTM2AQ8TAG5 236 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 RND1Q92730 232 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 LINC00574Q9H8X3 128 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 RPUSD1Q9UJJ7 312 aaKnown RBP12.39□□□□□ -0.43
SMG6-207ENST00000570756 A0A1B0GUT8 65 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 TM4SF5O14894 197 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 FGF6P10767 208 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms