RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 IGHV3-49A0A0A0MS15 119 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 IGLC7A0M8Q6 106 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 FOXI3A8MTJ6 420 aaPredicted RBP4.16□□□□□ -1.74
UBFD1-209ENST00000569919 TSC22D2O75157 780 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 HLA-DQB1P01920 261 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 FCGR3AP08637 254 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 CTXN2P0C2S0 81 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 TRAPPC2P0DI81 140 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 TRAPPC2BP0DI82 140 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 MT3P25713 68 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 CAMLGP49069 296 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 RPL30P62888 115 aaKnown RBP4.16□□□□□ -1.74
UBFD1-209ENST00000569919 P2RY14Q15391 338 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 ACSM3Q53FZ2 586 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 OR2B11Q5JQS5 317 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 UBE2UQ5VVX9 321 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 LRRTM1Q86UE6 522 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 MS4A15Q8N5U1 240 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 ZFP41Q8N8Y5 198 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 GDPD1Q8N9F7 314 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 UBAC2Q8NBM4 344 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 ZNF485Q8NCK3 441 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 TCTEX1D2Q8WW35 142 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 TMEM80Q96HE8 168 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 ZNF414Q96IQ9 312 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 GINS3Q9BRX5 216 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 NIPSNAP3BQ9BS92 247 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 FUNDC2Q9BWH2 189 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 VSIRQ9H7M9 311 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 CLEC5AQ9NY25 188 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 CLEC2DQ9UHP7 191 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 RABAC1Q9UI14 185 aa4.16□□□□□ -1.74
UBFD1-209ENST00000569919 FAT2Q9NYQ8 4349 aa4.15□□□□□ -1.74
UBFD1-209ENST00000569919 IGHV3OR16-13A0A075B7E8 117 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 IGHV3-74A0A0B4J1X5 117 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 IGHV3-38A0A0C4DH36 116 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 PNMA8CA0A1B0GUJ8 204 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 LOC100130705A0A1B0GUX0 176 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 FAM25EA8MYX2 175 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 J3QRK9 145 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 UPK2O00526 184 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 EI24O14681 340 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 OR13C7P0DN81 318 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 TALDO1P37837 337 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 GNGT1P63211 74 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 RCN1Q15293 331 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 TIMM50Q3ZCQ8 353 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 RBM48Q5RL73 367 aaKnown RBP4.15□□□□□ -1.75
UBFD1-209ENST00000569919 ZC2HC1BQ5TFG8 222 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 Q5VSD8 79 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 GSG1LQ6UXU4 331 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 Q6ZS49 121 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 OR10W1Q8NGF6 305 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 ZNRF2Q8NHG8 242 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 RAB40CQ96S21 281 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 TMEM231Q9H6L2 316 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 PLGRKTQ9HBL7 147 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 ZNF446Q9NWS9 450 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 SPATA2Q9UM82 520 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 PUS1Q9Y606 427 aaKnown RBP eCLIP4.15□□□□□ -1.75
UBFD1-209ENST00000569919 F11RQ9Y624 299 aaKnown RBP4.15□□□□□ -1.75
UBFD1-209ENST00000569919 HSPG2P98160 4391 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 NACAE9PAV3 2078 aa4.15□□□□□ -1.75
UBFD1-209ENST00000569919 IGHV3-21A0A0B4J1V1 117 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 TEX50A0A1B0GTY4 177 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 EFCAB10A6NFE3 127 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 KNCNA6PVL3 124 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 K7EIM0 57 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 K7EQG2 157 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 SLC17A2O00624 439 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 DENRO43583 198 aaKnown RBP4.14□□□□□ -1.75
UBFD1-209ENST00000569919 HPRT1P00492 218 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 HTN3P15516 51 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 NPPCP23582 126 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 GADD45AP24522 165 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 GNRHRP30968 328 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 FGF9P31371 208 aaPredicted RBP4.14□□□□□ -1.75
UBFD1-209ENST00000569919 FCGR2CP31995 323 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 EMP1P54849 157 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 CCL18P55774 89 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 TAS2R31P59538 309 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 RIGQ13278 110 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 ACTL10Q5JWF8 245 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 ZNF773Q6PK81 442 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 FAM24BQ8N5W8 94 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 OR1L8Q8NGR8 309 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 OR6F1Q8NGZ6 308 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 APH1BQ8WW43 257 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 C11orf52Q96A22 123 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 RAB3CQ96E17 227 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 LINC00479Q96M42 142 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 NXF2Q9GZY0 626 aaKnown RBP4.14□□□□□ -1.75
UBFD1-209ENST00000569919 PARLQ9H300 379 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 XCL2Q9UBD3 114 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 RAB22AQ9UL26 194 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 DNAH2Q9P225 4427 aa4.14□□□□□ -1.75
UBFD1-209ENST00000569919 HERC1Q15751 4861 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 TRAV3A0A0B4J244 114 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 ZNF705FA8MVS1 300 aaPredicted RBP4.13□□□□□ -1.75
UBFD1-209ENST00000569919 CASQ2O14958 399 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms