RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 PGLYRP1O75594 196 aaPredicted RBP3.78□□□□□ -1.8
LRRC28-208ENST00000558771 HBE1P02100 147 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 FCER2P06734 321 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 MYL9P24844 172 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 FUSP35637 526 aaKnown RBP eCLIP3.78□□□□□ -1.8
LRRC28-208ENST00000558771 EIF2B2P49770 351 aaKnown RBP3.78□□□□□ -1.8
LRRC28-208ENST00000558771 CCL18P55774 89 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 DEFB1P60022 68 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 DLK1P80370 383 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 ERHP84090 104 aaKnown RBP3.78□□□□□ -1.8
LRRC28-208ENST00000558771 SPINK9Q5DT21 86 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 C16orf54Q6UWD8 224 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 HOGA1Q86XE5 327 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 C1orf158Q8N1D5 194 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 PACRGLQ8N7B6 248 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 ZNF709Q8N972 641 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 TSPAN14Q8NG11 270 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 TMEM230Q96A57 120 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 MGLLQ99685 303 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 Q9H8V8 135 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 SEPSECSQ9HD40 501 aaKnown RBP3.78□□□□□ -1.8
LRRC28-208ENST00000558771 SCN3BQ9NY72 215 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 MDFICQ9P1T7 246 aa3.78□□□□□ -1.8
LRRC28-208ENST00000558771 SCGNO76038 276 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 IGKV1-17P01599 117 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 MBPP02686 304 aaPredicted RBP3.77□□□□□ -1.81
LRRC28-208ENST00000558771 SMR3BP02814 79 aaPredicted RBP3.77□□□□□ -1.81
LRRC28-208ENST00000558771 NKX2-1P43699 371 aaPredicted RBP3.77□□□□□ -1.81
LRRC28-208ENST00000558771 ALDH3B2P48448 385 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 AP2S1P53680 142 aaPredicted RBP3.77□□□□□ -1.81
LRRC28-208ENST00000558771 HERV-K104P61576 105 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 HSPE1P61604 102 aaKnown RBP3.77□□□□□ -1.81
LRRC28-208ENST00000558771 RRN3P1Q2M238 152 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 TIGITQ495A1 244 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 C10orf25Q5T742 122 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 SSX7Q7RTT5 188 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 OR5AP2Q8NGF4 316 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 OR4B1Q8NGF8 309 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 OR4X1Q8NH49 305 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 OR4A16Q8NH70 328 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 BORCS5Q969J3 196 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 SEC22AQ96IW7 307 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 C7orf50Q9BRJ6 194 aaKnown RBP3.77□□□□□ -1.81
LRRC28-208ENST00000558771 SLC35B3Q9H1N7 401 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 FNDC4Q9H6D8 234 aaPredicted RBP3.77□□□□□ -1.81
LRRC28-208ENST00000558771 NRN1Q9NPD7 142 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 C8orf4Q9NR00 106 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 GOLT1BQ9Y3E0 138 aa3.77□□□□□ -1.81
LRRC28-208ENST00000558771 HMCN2Q8NDA2 5059 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 TRAV18A0A075B6X5 111 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 MEIS3P1A6NDR6 274 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 LYRM9A8MSI8 78 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 F5H768 121 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 TNFRSF6BO95407 300 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 IGKV1-39P01597 117 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 IGKV1D-39P04432 117 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 PRM2P04554 102 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 RNASE2P10153 161 aaKnown RBP3.76□□□□□ -1.81
LRRC28-208ENST00000558771 SNCAP37840 140 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 OPRK1P41145 380 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 RFX2P48378 723 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 HOXA1P49639 335 aaPredicted RBP3.76□□□□□ -1.81
LRRC28-208ENST00000558771 CLINT1Q14677 625 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 USF2Q15853 346 aaPredicted RBP3.76□□□□□ -1.81
LRRC28-208ENST00000558771 IZUMO4Q1ZYL8 232 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 TTC32Q5I0X7 151 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 C22orf42Q6IC83 251 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 SIGLEC15Q6ZMC9 328 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 H2BFWTQ7Z2G1 175 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 C17orf77Q96MU5 243 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 ZNF2Q9BSG1 426 aaPredicted RBP3.76□□□□□ -1.81
LRRC28-208ENST00000558771 FXYD6Q9H0Q3 95 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 Q9H3A6 140 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 SAV1Q9H4B6 383 aaPredicted RBP3.76□□□□□ -1.81
LRRC28-208ENST00000558771 DUSP21Q9H596 190 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 RHBDL2Q9NX52 303 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 EHFQ9NZC4 300 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 PTTG2Q9NZH5 202 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 DAPK2Q9UIK4 370 aa3.76□□□□□ -1.81
LRRC28-208ENST00000558771 LRP1Q07954 4544 aaKnown RBP3.75□□□□□ -1.81
LRRC28-208ENST00000558771 TRAV30A0A087WSZ9 112 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 TRDV1A0A1B0GX56 115 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 A0A1W2PPQ1 181 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 ZNF705GA8MUZ8 300 aaPredicted RBP3.75□□□□□ -1.81
LRRC28-208ENST00000558771 F6UB75 175 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 INS-IGF2F8WCM5 200 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 CORTO00230 105 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 GPR31O00270 319 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 BUB3O43684 328 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 SCGB2A1O75556 95 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 ATP5G1P05496 136 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 IGLC1P0CG04 106 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 DEFB130BP0DP73 79 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 DEFB130AP0DP74 79 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 ATP5G3P48201 142 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 RORCP51449 518 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 SUB1P53999 127 aaKnown RBP eCLIP3.75□□□□□ -1.81
LRRC28-208ENST00000558771 KRTAP10-1P60331 282 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 PSG9Q00887 426 aa3.75□□□□□ -1.81
LRRC28-208ENST00000558771 DHODHQ02127 395 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms