RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	FKBP11	Q9NYL4	201 aa		3.17	□□□□□ -1.9
SCFD1-223	ENST00000557076	TAS2R8	Q9NYW2	309 aa		3.17	□□□□□ -1.9
SCFD1-223	ENST00000557076	POMP	Q9Y244	141 aa		3.17	□□□□□ -1.9
SCFD1-223	ENST00000557076	ARL2BP	Q9Y2Y0	163 aa		3.17	□□□□□ -1.9
SCFD1-223	ENST00000557076	AP4S1	Q9Y587	144 aa		3.17	□□□□□ -1.9
SCFD1-223	ENST00000557076	DNAH8	Q96JB1	4490 aa		3.17	□□□□□ -1.9
SCFD1-223	ENST00000557076	IGKV1D-8	A0A087WSZ0	117 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	TRAV9-2	A0A087WT02	112 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	IGLV5-52	A0A0A0MRZ9	124 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076		K7EP13	123 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	VCY	O14598	125 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	SIVA1	O15304	175 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	MT-CO2	P00403	227 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	IGHV3-48	P01763	117 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	DNAH10OS	P0CZ25	163 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	MYL12A	P19105	171 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	M6PR	P20645	277 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	NFYA	P23511	347 aa	Predicted RBP	3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	FXYD7	P58549	80 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	FCN2	Q15485	313 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	ZNF79	Q15937	498 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	C2orf76	Q3KRA6	126 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	HSP90B2P	Q58FF3	399 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	CNIH2	Q6PI25	160 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	FOXI2	Q6ZQN5	318 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076		Q6ZSA8	131 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	MS4A15	Q8N5U1	240 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	DMBX1	Q8NFW5	382 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	MAFIP	Q8WZ33	124 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	RAB3C	Q96E17	227 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	KRTAP4-4	Q9BYR3	166 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	KCNK15	Q9H427	330 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	SAV1	Q9H4B6	383 aa	Predicted RBP	3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	NRN1	Q9NPD7	142 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	CLEC2D	Q9UHP7	191 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	RAB22A	Q9UL26	194 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	DIMT1	Q9UNQ2	313 aa	Known RBP	3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	ORC6	Q9Y5N6	252 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	OR51B2	Q9Y5P1	312 aa		3.16	□□□□□ -1.9
SCFD1-223	ENST00000557076	TNXB	P22105	4242 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	TRAV26-1	A0A087WT03	109 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	IRGM	A1A4Y4	181 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	PLAC8L1	A1L4L8	177 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	SLC17A2	O00624	439 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	ATP8B1	O43520	1251 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	DENR	O43583	198 aa	Known RBP	3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	BUB3	O43684	328 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	SNAPC5	O75971	98 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	IGLV2-11	P01706	119 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	PRM2	P04554	102 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	HOXB5	P09067	269 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	MT1HL1	P0DM35	61 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	ANXA7	P20073	488 aa	Known RBP	3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	DTYMK	P23919	212 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	TALDO1	P37837	337 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	PPP5C	P53041	499 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	KRTAP10-12	P60413	245 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	OR5I1	Q13606	314 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	GDF5OS	Q5U4N7	250 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	TPRA1	Q86W33	373 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	ZFP41	Q8N8Y5	198 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	ZNF114	Q8NC26	417 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	OR4C16	Q8NGL9	310 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	OR10R2	Q8NGX6	335 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	OR10J6P	Q8NGY7	276 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	FCGR1B	Q92637	280 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	TMEM230	Q96A57	120 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	RRNAD1	Q96FB5	475 aa	Known RBP	3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	IGF2BP2-AS1	Q96M15	143 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	TMEM208	Q9BTX3	173 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	HINT2	Q9BX68	163 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	FAM107B	Q9H098	131 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	SLC35B3	Q9H1N7	401 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	COMMD9	Q9P000	198 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	PRND	Q9UKY0	176 aa		3.15	□□□□□ -1.91
SCFD1-223	ENST00000557076	FAT4	Q6V0I7	4981 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	TRAV30	A0A087WSZ9	112 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	LRCOL1	A6NCL2	159 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076		A8MTW9	85 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	ZNF705G	A8MUZ8	300 aa	Predicted RBP	3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	ZNF701	M0R085	212 aa	Predicted RBP	3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	SULT1C2	O00338	296 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	MFNG	O00587	321 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	CLN5	O75503	358 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	WBP4	O75554	376 aa	Known RBP	3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	IGKV1-17	P01599	117 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	UCHL1	P09936	223 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	HIST1H1D	P16402	221 aa	Known RBP	3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	AZU1	P20160	251 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	GADD45A	P24522	165 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	KRTAP5-9	P26371	169 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	ID1	P41134	155 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	AMT	P48728	403 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	PAX9	P55771	341 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	ARPC4	P59998	168 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	ERVK-16	P61578	105 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	ERH	P84090	104 aa	Known RBP	3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	ST3GAL4	Q11206	333 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	ARL6IP1	Q15041	203 aa		3.14	□□□□□ -1.91
SCFD1-223	ENST00000557076	RAB11B	Q15907	218 aa		3.14	□□□□□ -1.91

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