RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 A0A096LPF7 62 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 A0A0B4J293 547 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 TEX50A0A1B0GTY4 177 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 I3L2K1 104 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 J3QRK9 145 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 TNFRSF6BO95407 300 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 MT-CO2P00403 227 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 NPSP0C0P6 89 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 CD37P11049 281 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 NQO2P16083 231 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 CDKN1BP46527 198 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 HNRNPA3P51991 378 aaKnown RBP3.81□□□□□ -1.8
ATXN3-245ENST00000556958 TAS2R31P59538 309 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 INSL4Q14641 139 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 ZNF79Q15937 498 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 ZNF493Q6ZR52 646 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 TMED4Q7Z7H5 227 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 SMIM19Q96E16 107 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 LINC00052Q96N35 136 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 PAXXQ9BUH6 204 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 NDUFA4L2Q9NRX3 87 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 MGAT4CQ9UBM8 478 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 SPATA2Q9UM82 520 aa3.81□□□□□ -1.8
ATXN3-245ENST00000556958 TRBV5-5A0A0J9YX44 114 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 A0A1B0GU03 582 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 SMIM31A0A1B0GVY4 71 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 H0YIZ8 118 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 SOCS1O15524 211 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 RBFOX2O43251 390 aaKnown RBP eCLIP3.8□□□□□ -1.8
ATXN3-245ENST00000556958 TMEM50AO95807 157 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 HPRT1P00492 218 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 INSP01308 110 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 MAPK3P27361 379 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-245ENST00000556958 PSMB9P28065 219 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 ETV6P41212 452 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 RPS25P62851 125 aaKnown RBP3.8□□□□□ -1.8
ATXN3-245ENST00000556958 TBCEQ15813 527 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-245ENST00000556958 HSD17B12Q53GQ0 312 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 GDF5OSQ5U4N7 250 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 FAM78BQ5VT40 261 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 C16orf54Q6UWD8 224 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 PRSS48Q7RTY5 328 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 H1FOOQ8IZA3 346 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-245ENST00000556958 MS4A15Q8N5U1 240 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 DMBX1Q8NFW5 382 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 COQ8AQ8NI60 647 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 TMEM37Q8WXS4 190 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 C16orf74Q96GX8 76 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 LINC01587Q99440 93 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 TSC22D3Q99576 134 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 MGLLQ99685 303 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 DUSP21Q9H596 190 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 PLGRKTQ9HBL7 147 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 VCX3AQ9NNX9 186 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 NOP10Q9NPE3 64 aaKnown RBP3.8□□□□□ -1.8
ATXN3-245ENST00000556958 FKBP14Q9NWM8 211 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 FKBP11Q9NYL4 201 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 AK6Q9Y3D8 172 aaKnown RBP3.8□□□□□ -1.8
ATXN3-245ENST00000556958 OR2W1Q9Y3N9 320 aa3.8□□□□□ -1.8
ATXN3-245ENST00000556958 LOC100506127A0A0U1RQW1 187 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 PLAC8L1A1L4L8 177 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 SMIM30A4D0T7 59 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 ZNF98A6NK75 572 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 MFNGO00587 321 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 GSTZ1O43708 216 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-245ENST00000556958 SNAPC5O75971 98 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 IGHV3-48P01763 117 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 HLA-DQB1P01920 261 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 PRM2P04554 102 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 CRYGDP07320 174 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 HNRNPCP07910 306 aaKnown RBP eCLIP3.79□□□□□ -1.8
ATXN3-245ENST00000556958 CTXN2P0C2S0 81 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 AZU1P20160 251 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 RORCP51449 518 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 PPP5CP53041 499 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 PAX9P55771 341 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 BRWD1-AS2P59051 145 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 TAS2R60P59551 318 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 ERVK-16P61578 105 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 RPS11P62280 158 aaKnown RBP eCLIP3.79□□□□□ -1.8
ATXN3-245ENST00000556958 P2RY14Q15391 338 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 TRAM1Q15629 374 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 NEDD8Q15843 81 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 POU2AF1Q16633 256 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 HES5Q5TA89 166 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 SFXN4Q6P4A7 337 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 TMEM144Q7Z5S9 345 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 GPR141Q7Z602 305 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 SPAG16Q8N0X2 631 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 TMEM256Q8N2U0 113 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 FAM89BQ8N5H3 189 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 ZNF485Q8NCK3 441 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 TRIM63Q969Q1 353 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 PINX1Q96BK5 328 aaKnown RBP3.79□□□□□ -1.8
ATXN3-245ENST00000556958 PGLYRP3Q96LB9 341 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 DERL3Q96Q80 235 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 LINC00467Q9BRT7 94 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 PECRQ9BY49 303 aa3.79□□□□□ -1.8
ATXN3-245ENST00000556958 ACOT13Q9NPJ3 140 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 1180.9 ms