RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 NABP1Q96AH0 204 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 ZNF689Q96CS4 500 aaPredicted RBP4.94□□□□□ -1.62
TDP1-215ENST00000556498 ATXN7L3BQ96GX2 97 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 TMEM204Q9BSN7 226 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 SHANK2-AS3Q9BTD1 123 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 RPUSD1Q9UJJ7 312 aaKnown RBP4.94□□□□□ -1.62
TDP1-215ENST00000556498 NUP98P52948 1817 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 TSC2P49815 1807 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 TRAV8-4A0A0B4J246 113 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 TRBV7-6A0A0J9YX20 115 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 M0QZQ0 153 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 NDUFB2O95178 105 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 PLAUP00749 431 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 RFPL3SP0C7P2 107 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 GP1BBP13224 206 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 HLA-DRB4P13762 266 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 UBE2E1P51965 193 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 EBLN2Q6P2I7 272 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 IGFL2Q6UWQ7 119 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 ZNF793Q6ZN11 406 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 UBR3Q6ZT12 1888 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 C6orf201Q7Z4U5 140 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 NFE4Q86UQ8 179 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 MMD2Q8IY49 270 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 FBXL14Q8N1E6 418 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 LINC00311Q8N616 119 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 OR52N5Q8NH56 324 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 FAM57AQ8TBR7 257 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 NT5CQ8TCD5 201 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 SSMEM1Q8WWF3 244 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 UBE2E2Q96LR5 201 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 CHCHD5Q9BSY4 110 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 APOOQ9BUR5 198 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 SRXN1Q9BYN0 137 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 AICDAQ9GZX7 198 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 TNS1Q9HBL0 1735 aaKnown RBP4.93□□□□□ -1.62
TDP1-215ENST00000556498 ZNF286AQ9HBT8 521 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 FAM60AQ9NP50 221 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 STARD5Q9NSY2 213 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 OCIAD1Q9NX40 245 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 TAAR2Q9P1P5 351 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 C19orf25Q9UFG5 118 aaPredicted RBP4.93□□□□□ -1.62
TDP1-215ENST00000556498 PILRAQ9UKJ1 303 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 HLA-DRB4X5D2U9 266 aa4.93□□□□□ -1.62
TDP1-215ENST00000556498 WDR90Q96KV7 1748 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 TRGV11A0A075B6L2 103 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 TRGV5A0A0B4J1U4 118 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 TRAV8-2A0A0B4J237 113 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 hDV102S1A0JD36 115 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 SNURFLB1AK76 121 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 H3BT86 120 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 CD7P09564 240 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 COL8A2P25067 703 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 GFERP55789 205 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 UBE2L3P68036 154 aaKnown RBP4.92□□□□□ -1.62
TDP1-215ENST00000556498 DPTQ07507 201 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 DAZ2Q13117 558 aaKnown RBP4.92□□□□□ -1.62
TDP1-215ENST00000556498 INSL4Q14641 139 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 LGALS9BQ3B8N2 356 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 SPANXN4Q5MJ08 99 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 DGAT2L6Q6ZPD8 337 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 DAZ4Q86SG3 579 aaKnown RBP4.92□□□□□ -1.62
TDP1-215ENST00000556498 HMGN2P46Q86SG4 172 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 RNF182Q8N6D2 247 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 NMNAT3Q96T66 252 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 DAZ1Q9NQZ3 744 aaKnown RBP4.92□□□□□ -1.62
TDP1-215ENST00000556498 DAZ3Q9NR90 486 aaKnown RBP4.92□□□□□ -1.62
TDP1-215ENST00000556498 OTORQ9NRC9 128 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 PCTPQ9UKL6 214 aa4.92□□□□□ -1.62
TDP1-215ENST00000556498 NCKAP5O14513 1909 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 SLX4Q8IY92 1834 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 LINC01619G3V211 115 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 CDX4O14627 284 aaPredicted RBP4.91□□□□□ -1.62
TDP1-215ENST00000556498 MRPS12O15235 138 aaKnown RBP4.91□□□□□ -1.62
TDP1-215ENST00000556498 LEPROTL1O95214 131 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 WISP3O95389 354 aaPredicted RBP4.91□□□□□ -1.62
TDP1-215ENST00000556498 RPS11P62280 158 aaKnown RBP eCLIP4.91□□□□□ -1.62
TDP1-215ENST00000556498 CCL8P80075 99 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 ARL16Q0P5N6 197 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 TRIP6Q15654 476 aaKnown RBP4.91□□□□□ -1.62
TDP1-215ENST00000556498 FAM78AQ5JUQ0 283 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 LCE4AQ5TA78 99 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 LCN10Q6JVE6 187 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 POM121L12Q8N7R1 296 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 OR2T6Q8NHC8 308 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 ZNF721Q8TF20 911 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 EEF1AKMT3Q96AZ1 226 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 ZC2HC1AQ96GY0 325 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 FAM19A4Q96LR4 140 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 HDHD3Q9BSH5 251 aaPredicted RBP4.91□□□□□ -1.62
TDP1-215ENST00000556498 NRXN2Q9P2S2 1712 aa4.91□□□□□ -1.62
TDP1-215ENST00000556498 TMEM131Q92545 1883 aa4.9□□□□□ -1.62
TDP1-215ENST00000556498 CCL21O00585 134 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 VCYO14598 125 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 LGALS2P05162 132 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 EGR2P11161 476 aaPredicted RBP4.9□□□□□ -1.63
TDP1-215ENST00000556498 CTLA4P16410 223 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 PEBP1P30086 187 aaKnown RBP4.9□□□□□ -1.63
TDP1-215ENST00000556498 APOC4P55056 127 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms