RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 PGLYRP3Q96LB9 341 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 CABLES2Q9BTV7 478 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 LPAR5Q9H1C0 372 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 RNF167Q9H6Y7 350 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 MCUBQ9NWR8 336 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 MRPS7Q9Y2R9 242 aaKnown RBP3.44□□□□□ -1.86
ATXN3-239ENST00000556315 IGKV3-7A0A075B6H7 116 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 TRAV14DV4A0A0A6YYC5 116 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 LINC00862A6NCI5 91 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 OR2T8A6NH00 312 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 FOXI3A8MTJ6 420 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-239ENST00000556315 DNASE2O00115 360 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-239ENST00000556315 ZNF207O43670 478 aaKnown RBP3.43□□□□□ -1.86
ATXN3-239ENST00000556315 SLC22A5O76082 557 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 HRASP01112 189 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 REG1AP05451 166 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 SPP1P10451 314 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 HLA-GP17693 338 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 MAPK3P27361 379 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-239ENST00000556315 AP2S1P53680 142 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-239ENST00000556315 DEFB131AP59861 70 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 RPS25P62851 125 aaKnown RBP3.43□□□□□ -1.86
ATXN3-239ENST00000556315 GAGE2BQ13066 116 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 PLA2G7Q13093 441 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 IL18Q14116 193 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 GAGE2EQ4V326 116 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 GAGE2AQ6NT46 116 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 SLC25A24Q6NUK1 477 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 GBGT1Q8N5D6 347 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 ZFP41Q8N8Y5 198 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 ARHGAP5-AS1Q96IT6 56 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 GINS4Q9BRT9 223 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 SCRT1Q9BWW7 348 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 PECRQ9BY49 303 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 MED28Q9H204 178 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 TMEM14BQ9NUH8 114 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 C21orf62Q9NYP8 219 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 COMMD3Q9UBI1 195 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 GAGE2DQ9UEU5 116 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 OR2W1Q9Y3N9 320 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 ALG5Q9Y673 324 aa3.43□□□□□ -1.86
ATXN3-239ENST00000556315 APOBP04114 4563 aaKnown RBP3.42□□□□□ -1.86
ATXN3-239ENST00000556315 IGHV3OR16-8A0A075B7F1 116 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 TRAV2A0A0B4J234 112 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 A0A1B0GUV1 79 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 A0A1W2PS18 150 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 PDCD5O14737 125 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 HPGDSO60760 199 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 YIF1AO95070 293 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 IFNA7P01567 189 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 CTSGP08311 255 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 SPART-AS1P0CW21 52 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 ANXA3P12429 323 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 OR2B8PP59922 312 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 RPL30P62888 115 aaKnown RBP3.42□□□□□ -1.86
ATXN3-239ENST00000556315 SSBP1Q04837 148 aaKnown RBP3.42□□□□□ -1.86
ATXN3-239ENST00000556315 MXD1Q05195 221 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 P2RY14Q15391 338 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 ACSM3Q53FZ2 586 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 LEMD1Q68G75 181 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 SFXN4Q6P4A7 337 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 TMEM91Q6ZNR0 172 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 KCTD9Q7L273 389 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 TCF24Q7RTU0 167 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 HSD17B13Q7Z5P4 300 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-239ENST00000556315 SPATA12Q7Z6I5 190 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 TRPT1Q86TN4 253 aaKnown RBP3.42□□□□□ -1.86
ATXN3-239ENST00000556315 LRRTM1Q86UE6 522 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 H1FOOQ8IZA3 346 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-239ENST00000556315 C6orf223Q8N319 242 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 TOMM5Q8N4H5 51 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 CSNK1G2-AS1Q8NCQ2 148 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 OR56B1Q8NGI3 324 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 OR4S2Q8NH73 311 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 OR10C1Q96KK4 312 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 GFI1Q99684 422 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 HSD17B10Q99714 261 aaKnown RBP3.42□□□□□ -1.86
ATXN3-239ENST00000556315 COMMD5Q9GZQ3 224 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 MS4A6AQ9H2W1 248 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 MED9Q9NWA0 146 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 BET1LQ9NYM9 111 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 EXTL2Q9UBQ6 330 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 SCP2D1Q9UJQ7 156 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 SPATA2Q9UM82 520 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 CELA1Q9UNI1 258 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 RBMX2Q9Y388 322 aaKnown RBP3.42□□□□□ -1.86
ATXN3-239ENST00000556315 TMED3Q9Y3Q3 217 aa3.42□□□□□ -1.86
ATXN3-239ENST00000556315 IGHV3-49A0A0A0MS15 119 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 NBDYA0A0U1RRE5 68 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 IGLC7A0M8Q6 106 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 SNRPGP15A8MWD9 76 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 PRAC2D3DTV9 90 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 UPK2O00526 184 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 NUPL2O15504 423 aaKnown RBP3.41□□□□□ -1.86
ATXN3-239ENST00000556315 TCRBP04435 133 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 IL5P05113 134 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 EIF4EP06730 217 aaKnown RBP3.41□□□□□ -1.86
ATXN3-239ENST00000556315 FCGR3AP08637 254 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 UCHL1P09936 223 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 CTXN2P0C2S0 81 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms