RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 HYPMO75409 117 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 NDUFB4O95168 129 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 CRYBA1P05813 215 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 MSMBP08118 114 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 EGR2P11161 476 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-235ENST00000556082 HIST1H1BP16401 226 aaKnown RBP6.53□□□□□ -1.36
ATXN3-235ENST00000556082 RAB5AP20339 215 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 CD24P25063 80 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 FCGR2BP31994 310 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-235ENST00000556082 ATP5G3P48201 142 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 UBE2G2P60604 165 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 RPL23P62829 140 aaKnown RBP6.53□□□□□ -1.36
ATXN3-235ENST00000556082 AKIRIN2Q53H80 203 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 FAM120AOSQ5T036 256 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 OR51G1Q8NGK1 321 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 RPUSD4Q96CM3 377 aaKnown RBP6.53□□□□□ -1.36
ATXN3-235ENST00000556082 ANAPC16Q96DE5 110 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 PERPQ96FX8 193 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 TXN2Q99757 166 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 RASL11BQ9BPW5 248 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 SLC25A2Q9BXI2 301 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 THYN1Q9P016 225 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 USP9XQ93008 2570 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-235ENST00000556082 C9JCJ5 164 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 IGKV1-17P01599 117 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 IGHV3-48P01763 117 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 YPEL3P61236 119 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-235ENST00000556082 ELOBQ15370 118 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 ZNF674Q2M3X9 581 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 RUSC1-AS1Q66K80 236 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 ZNF343Q6P1L6 599 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 FAM24BQ8N5W8 94 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 SGMS2Q8NHU3 365 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 RBM14Q96PK6 669 aaKnown RBP6.52□□□□□ -1.37
ATXN3-235ENST00000556082 IMMP2LQ96T52 175 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 OR51M1Q9H341 326 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 ZNF355PQ9NSJ1 428 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 BEX4Q9NWD9 120 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-235ENST00000556082 TMEM14CQ9P0S9 112 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 MLXQ9UH92 298 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 ARHGAP32A7KAX9 2087 aa6.52□□□□□ -1.37
ATXN3-235ENST00000556082 LRBAP50851 2863 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 SPTAN1Q13813 2472 aaKnown RBP6.51□□□□□ -1.37
ATXN3-235ENST00000556082 TRBV24-1A0A075B6N3 115 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 A0A096LNT2 108 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 J3QLI3 93 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 PPP1R2P9O14990 202 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 TGOLN2O43493 480 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 OR7C2O60412 319 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 TOMM40O96008 361 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 RD3LP0DJH9 198 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 APELAP0DMC3 54 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 PSG1P11464 419 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 MFAP4P55083 255 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 KRTAP10-2P60368 255 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 NDPQ00604 133 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 CLEC12BQ2HXU8 276 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 C19orf35Q6ZS72 473 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 LINC00305Q7Z4B0 112 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 S100A7AQ86SG5 101 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 LINC01551Q86U37 167 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 LRRC75A-AS1Q8N1F1 130 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 OR5AU1Q8NGC0 362 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 FAM110DQ8TAY7 271 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-235ENST00000556082 PIFOQ8TCI5 191 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 VN1R17PQ8TDU5 208 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 ISOC2Q96AB3 205 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 FXYD5Q96DB9 178 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 ATP6V0BQ99437 205 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 PYGO2Q9BRQ0 406 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 PAXXQ9BUH6 204 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 MRPL27Q9P0M9 148 aaKnown RBP6.51□□□□□ -1.37
ATXN3-235ENST00000556082 RNF24Q9Y225 148 aa6.51□□□□□ -1.37
ATXN3-235ENST00000556082 ZNF462Q96JM2 2506 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 TRBV9A0A0B4J1U6 114 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 TRAV5A0A0B4J249 113 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 WI2-2373I1.2A0A1W2PRP0 233 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 HELTA6NFD8 242 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 C1orf196B1AJZ1 125 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 SCGB2A1O75556 95 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 BRI3O95415 125 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 PFN1P07737 140 aaKnown RBP6.5□□□□□ -1.37
ATXN3-235ENST00000556082 ORM2P19652 201 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 SRP14P37108 136 aaKnown RBP6.5□□□□□ -1.37
ATXN3-235ENST00000556082 MYCNOSP40205 109 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 CRIP2P52943 208 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-235ENST00000556082 RAB5BP61020 215 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 UBE2L3P68036 154 aaKnown RBP6.5□□□□□ -1.37
ATXN3-235ENST00000556082 LOXL1Q08397 574 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-235ENST00000556082 ADIRFQ15847 76 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 TIGITQ495A1 244 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 MORN5Q5VZ52 161 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 C5orf56Q8N8D9 126 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 LINC00482Q8N8I6 264 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 OR1B1Q8NGR6 318 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 C2CD4CQ8TF44 421 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 SPATA25Q9BR10 227 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 FAM103A1Q9BTL3 118 aaKnown RBP6.5□□□□□ -1.37
ATXN3-235ENST00000556082 HIGD1AQ9Y241 93 aa6.5□□□□□ -1.37
ATXN3-235ENST00000556082 DCHS2Q6V1P9 2916 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms