RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 HLA-DPB1P04440 258 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 CECR9P0C854 216 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 TRGC1P0CF51 173 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 CRYGAP11844 174 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 ELK1P19419 428 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 MYCNOSP40205 109 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 UBE2AP49459 152 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 CRISP3P54108 245 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 PPP1CAP62136 330 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 RPS23P62266 143 aaKnown RBP2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 RPS11P62280 158 aaKnown RBP eCLIP2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 HERVK_113P63121 156 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 NDPQ00604 133 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 ZNF90Q03938 601 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 EBI3Q14213 229 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 DIAPH2-AS1Q14236 149 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 PMCHL1Q16048 86 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 UBE2SQ16763 222 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 RSPO1Q2MKA7 263 aaPredicted RBP2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 TDRG1Q3Y452 100 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 MRPL2Q5T653 305 aaKnown RBP2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 AAED1Q7RTV5 226 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 DAZ4Q86SG3 579 aaKnown RBP2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 ZNF584Q8IVC4 421 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 Q8N9W7 124 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 C11orf72Q8NBR9 251 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 OR11H7Q8NGC8 314 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 OR4X2Q8NGF9 303 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 OR2T35Q8NGX2 323 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 OR4A5Q8NH83 315 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 OTOSQ8NHW6 89 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 MUCL1Q96DR8 90 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 MS4A6EQ96DS6 147 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 NEURL3Q96EH8 262 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 SLC25A44Q96H78 314 aaPredicted RBP2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 IGF2BP2-AS1Q96M15 143 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 METTL26Q96S19 204 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 EIF5A2Q9GZV4 153 aaKnown RBP2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 ST20Q9HBF5 79 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 ZNF331Q9NQX6 463 aaPredicted RBP2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 DAZ1Q9NQZ3 744 aaKnown RBP2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 PRR34Q9NV39 138 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 TVP23BQ9NYZ1 205 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 ZNF222Q9UK12 451 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 LAMC3Q9Y6N6 1575 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 MADDQ8WXG6 1647 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 PLXND1Q9Y4D7 1925 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 ATRXP46100 2492 aa2.05□□□□□ -2.08
MTHFD1-212ENST00000555858 TRAV27A0A087WT01 109 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 IGHV3-66A0A0C4DH42 116 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 IGHV3-64DA0A0J9YX35 117 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 WI2-2373I1.2A0A1W2PRP0 233 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 IRGMA1A4Y4 181 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 PGPA6NDG6 321 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 TMEM235A6NFC5 223 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 TLCD2A6NGC4 264 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 C8orf87E5RJ46 101 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 AGRNO00468 2067 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 SOCS1O15524 211 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 KIAA0556O60303 1618 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 MEGF6O75095 1541 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 PGLYRP1O75594 196 aaPredicted RBP2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 SBF1O95248 1867 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 APOMO95445 188 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 EPPINO95925 133 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 MT-ND6P03923 174 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 SFTA3P0C7M3 94 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 LINC00869P0C866 280 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 GLI2P10070 1586 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 CTLA4P16410 223 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 CCL1P22362 96 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 FKBP2P26885 142 aaKnown RBP2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 INPP1P49441 399 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 ZNF136P52737 540 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 QRFPP83859 136 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 CST6Q15828 149 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 RTL8BQ17RB0 113 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 Q56UQ5 140 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 C9orf153Q5TBE3 101 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 LINC01545Q5VT33 79 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 LCN8Q6JVE9 175 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 KRTAP5-3Q6L8H2 238 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 SHISA6Q6ZSJ9 500 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 VN1R4Q7Z5H5 301 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 TRAPPC6BQ86SZ2 158 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 C1orf174Q8IYL3 243 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 SAXO1Q8IYX7 474 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 C10orf111Q8N326 155 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 C10orf126Q8N4M7 172 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 C3orf22Q8N5N4 141 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 OR4K13Q8NH42 304 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 SGMS2Q8NHU3 365 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 LMX1AQ8TE12 382 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 ARAP2Q8WZ64 1704 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 TMEM158Q8WZ71 300 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 BORCS8Q96FH0 119 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 DPH3Q96FX2 82 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 FAM19A4Q96LR4 140 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 NMNAT3Q96T66 252 aa2.04□□□□□ -2.08
MTHFD1-212ENST00000555858 TBL1YQ9BQ87 522 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms