RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 CCDC160A6NGH7 325 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 C1orf196B1AJZ1 125 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 ZNF25P17030 456 aaPredicted RBP0.41□□□□□ -2.34
CCDC38-204ENST00000546816 ANP32AP39687 249 aaKnown RBP0.41□□□□□ -2.34
CCDC38-204ENST00000546816 ERVS71-1P61550 626 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 TEX261Q6UWH6 196 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 KRTAP19-3Q7Z4W3 81 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 Q8IYB0 196 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 Q8N6K4 173 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 LINC00301Q8NCQ3 95 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 OR2T10Q8NGZ9 312 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 ITFG2Q969R8 447 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 PPP1R14BQ96C90 147 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 SLAMF6Q96DU3 332 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 TLNRD1Q9H1K6 362 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 UCK1Q9HA47 277 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 PARVBQ9HBI1 364 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 C14orf132Q9NPU4 83 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 CHCHD2Q9Y6H1 151 aaPredicted RBP0.41□□□□□ -2.34
CCDC38-204ENST00000546816 U3KQ87 197 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 KMT2DO14686 5537 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 ECM29Q5VYK3 1845 aa0.41□□□□□ -2.34
CCDC38-204ENST00000546816 EML6Q6ZMW3 1958 aa0.4□□□□□ -2.35
CCDC38-204ENST00000546816 TMEM114B3SHH9 223 aa0.4□□□□□ -2.35
CCDC38-204ENST00000546816 CLDN25C9JDP6 229 aa0.4□□□□□ -2.35
CCDC38-204ENST00000546816 CYB5BO43169 146 aa0.4□□□□□ -2.35
CCDC38-204ENST00000546816 DYNLT1P63172 113 aa0.4□□□□□ -2.35
CCDC38-204ENST00000546816 CLECL1Q8IZS7 167 aa0.4□□□□□ -2.35
CCDC38-204ENST00000546816 FAM172AQ8WUF8 416 aa0.4□□□□□ -2.35
CCDC38-204ENST00000546816 PATE1Q8WXA2 126 aa0.4□□□□□ -2.35
CCDC38-204ENST00000546816 AMELYQ99218 206 aa0.4□□□□□ -2.35
CCDC38-204ENST00000546816 PRADC1Q9BSG0 188 aa0.4□□□□□ -2.35
CCDC38-204ENST00000546816 ARHGEF28Q8N1W1 1705 aaKnown RBP0.4□□□□□ -2.35
CCDC38-204ENST00000546816 COL1A1P02452 1464 aaPredicted RBP0.4□□□□□ -2.35
CCDC38-204ENST00000546816 RIMBP3CA6NJZ7 1639 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 RIMBP3BA6NNM3 1639 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 RIMBP3Q9UFD9 1639 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 LAMA4Q16363 1823 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 TRAV4A0A0B4J268 109 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 CCL25O15444 150 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 CCL16O15467 120 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 OR7C1O76099 320 aaPredicted RBP0.39□□□□□ -2.35
CCDC38-204ENST00000546816 GADD45GO95257 159 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 DHFRP00374 187 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 CTXN2P0C2S0 81 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 CYBAP13498 195 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 DEFA3P59666 94 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 RHOBP62745 196 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 EIF5AP63241 154 aaKnown RBP0.39□□□□□ -2.35
CCDC38-204ENST00000546816 SPRNQ5BIV9 151 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 SLC30A7Q8NEW0 376 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 OR11H6Q8NGC7 330 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 STAG3L4Q8TBR4 150 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 C6orf62Q9GZU0 229 aaPredicted RBP0.39□□□□□ -2.35
CCDC38-204ENST00000546816 TMEM126AQ9H061 195 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 SYNE2Q8WXH0 6885 aaKnown RBP0.39□□□□□ -2.35
CCDC38-204ENST00000546816 MCM3APO60318 1980 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
CCDC38-204ENST00000546816 FMN1Q68DA7 1419 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 CEP192Q8TEP8 1941 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 TRBV19A0A075B6N1 114 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 TRBV6-4A0A1B0GX49 114 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 PIGPP57054 158 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 ROMO1P60602 79 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 RRN3P1Q2M238 152 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 LYRM7Q5U5X0 104 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 SBSPONQ8IVN8 264 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 GNPDA2Q8TDQ7 276 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 BORCS5Q969J3 196 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 SIGMAR1Q99720 223 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 LINC00467Q9BRT7 94 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 TMEM70Q9BUB7 260 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 NMNAT1Q9HAN9 279 aaPredicted RBP0.38□□□□□ -2.35
CCDC38-204ENST00000546816 DENND4CQ5VZ89 1909 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 PLXND1Q9Y4D7 1925 aa0.38□□□□□ -2.35
CCDC38-204ENST00000546816 TNRC6AQ8NDV7 1962 aaKnown RBP0.37□□□□□ -2.35
CCDC38-204ENST00000546816 TAF1LQ8IZX4 1826 aa0.37□□□□□ -2.35
CCDC38-204ENST00000546816 TRGV10A0A0A0MS01 117 aa0.37□□□□□ -2.35
CCDC38-204ENST00000546816 TCRBV4S1A1TA0A5B7 111 aa0.37□□□□□ -2.35
CCDC38-204ENST00000546816 FAM159BA6NKW6 160 aa0.37□□□□□ -2.35
CCDC38-204ENST00000546816 TIMM17BO60830 172 aa0.37□□□□□ -2.35
CCDC38-204ENST00000546816 ERP29P30040 261 aaKnown RBP0.37□□□□□ -2.35
CCDC38-204ENST00000546816 SRP14P37108 136 aaKnown RBP0.37□□□□□ -2.35
CCDC38-204ENST00000546816 SERPINB9P50453 376 aa0.37□□□□□ -2.35
CCDC38-204ENST00000546816 PSG9Q00887 426 aa0.37□□□□□ -2.35
CCDC38-204ENST00000546816 KRR1Q13601 381 aaKnown RBP0.37□□□□□ -2.35
CCDC38-204ENST00000546816 C22orf39Q6P5X5 142 aa0.37□□□□□ -2.35
CCDC38-204ENST00000546816 PDZD9Q8IXQ8 264 aa0.37□□□□□ -2.35
CCDC38-204ENST00000546816 TMEM254Q8TBM7 123 aa0.37□□□□□ -2.35
CCDC38-204ENST00000546816 BTF3L4Q96K17 158 aa0.37□□□□□ -2.35
CCDC38-204ENST00000546816 GPER1Q99527 375 aa0.37□□□□□ -2.35
CCDC38-204ENST00000546816 KIFC1Q9BW19 673 aa0.37□□□□□ -2.35
CCDC38-204ENST00000546816 TNS3Q68CZ2 1445 aa0.37□□□□□ -2.35
CCDC38-204ENST00000546816 PEAK1Q9H792 1746 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 A8MWV9 139 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 NCR3O14931 201 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 NUPR1O60356 82 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 CST2P09228 141 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 ATP5G3P48201 142 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms