RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 RNF7Q9UBF6 113 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 PILRAQ9UKJ1 303 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 PCTPQ9UKL6 214 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 TTC28Q96AY4 2481 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 J3QLW9 94 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 CD7P09564 240 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 GP1BBP13224 206 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 ATP5EP56381 51 aaPredicted RBP4.13□□□□□ -1.75
UBE4A-203ENST00000545354 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.13□□□□□ -1.75
UBE4A-203ENST00000545354 OR52N5Q8NH56 324 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 SSMEM1Q8WWF3 244 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 EEF1AKMT3Q96AZ1 226 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 RPP25Q9BUL9 199 aaKnown RBP4.13□□□□□ -1.75
UBE4A-203ENST00000545354 TAAR2Q9P1P5 351 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 IL36RNQ9UBH0 155 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 LSM4Q9Y4Z0 139 aaKnown RBP4.13□□□□□ -1.75
UBE4A-203ENST00000545354 PAPPA2Q9BXP8 1791 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 NUP98P52948 1817 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 TRGV5A0A0B4J1U4 118 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 NCBP2LA6PVI3 153 aaKnown RBP4.13□□□□□ -1.75
UBE4A-203ENST00000545354 BMPR1BO00238 502 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 CDX4O14627 284 aaPredicted RBP4.13□□□□□ -1.75
UBE4A-203ENST00000545354 RFPL3SP0C7P2 107 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 CTLA4P16410 223 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 PEBP1P30086 187 aaKnown RBP4.13□□□□□ -1.75
UBE4A-203ENST00000545354 FKBP1AP62942 108 aaKnown RBP4.13□□□□□ -1.75
UBE4A-203ENST00000545354 FAM78AQ5JUQ0 283 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 TMEM170BQ5T4T1 132 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 Q6ZVL8 140 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 LINC00305Q7Z4B0 112 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 BCL6BQ8N143 479 aaPredicted RBP4.13□□□□□ -1.75
UBE4A-203ENST00000545354 LINC00311Q8N616 119 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 ZNF721Q8TF20 911 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 PRSS27Q9BQR3 290 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 PRO3102Q9H379 93 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 DAZ1Q9NQZ3 744 aaKnown RBP4.13□□□□□ -1.75
UBE4A-203ENST00000545354 RNF114Q9Y508 228 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 TIMM9Q9Y5J7 89 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 HILPDAQ9Y5L2 63 aa4.13□□□□□ -1.75
UBE4A-203ENST00000545354 LGALS2P05162 132 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 ASAH2BP0C7U1 165 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 FXYD6P3P58550 94 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 RPL11P62913 178 aaKnown RBP4.12□□□□□ -1.75
UBE4A-203ENST00000545354 ADIGQ0VDE8 80 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 FHL3Q13643 280 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 SCGB1D4Q6XE38 83 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 PDPNQ86YL7 162 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 SRSF12Q8WXF0 261 aaKnown RBP4.12□□□□□ -1.75
UBE4A-203ENST00000545354 OTORQ9NRC9 128 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 TIMM13Q9Y5L4 95 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-203ENST00000545354 KAT6AQ92794 2004 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 TMEM131Q92545 1883 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 MAST2Q6P0Q8 1798 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 MCM3APO60318 1980 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 TRAV8-1A0A0A6YYK1 113 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 TIMM23O14925 209 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 ELANEP08246 267 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 COL8A2P25067 703 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 GFERP55789 205 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 DAD1P61803 113 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 SRSF9Q13242 221 aaKnown RBP eCLIP4.12□□□□□ -1.75
UBE4A-203ENST00000545354 RSPO4Q2I0M5 234 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-203ENST00000545354 LCN10Q6JVE6 187 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 ZNF793Q6ZN11 406 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 LRRC29Q8WV35 223 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 FAM3DQ96BQ1 224 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 C18orf15Q96N68 181 aa4.12□□□□□ -1.75
UBE4A-203ENST00000545354 TDRD15B5MCY1 1934 aaKnown RBP4.11□□□□□ -1.75
UBE4A-203ENST00000545354 TRAV17A0A0B4J275 112 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 C17orf100A8MU93 164 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 F2Z2F3 143 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 H0Y8X5 98 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 NDUFB3O43676 98 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 EFNA2O43921 213 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 SSR2P43308 183 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 UBE2E1P51965 193 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 DAZ2Q13117 558 aaKnown RBP4.11□□□□□ -1.75
UBE4A-203ENST00000545354 MLF2Q15773 248 aaPredicted RBP4.11□□□□□ -1.75
UBE4A-203ENST00000545354 EEF1DP3Q658K8 133 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 LGALS9CQ6DKI2 356 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 ATP5L2Q7Z4Y8 100 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 DAZ4Q86SG3 579 aaKnown RBP4.11□□□□□ -1.75
UBE4A-203ENST00000545354 TMEM158Q8WZ71 300 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 ZC2HC1AQ96GY0 325 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 FAM19A4Q96LR4 140 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 UBE2E2Q96LR5 201 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 GPX7Q96SL4 187 aaPredicted RBP4.11□□□□□ -1.75
UBE4A-203ENST00000545354 DAZ3Q9NR90 486 aaKnown RBP4.11□□□□□ -1.75
UBE4A-203ENST00000545354 OARD1Q9Y530 152 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 A0A0G2JMZ2 1700 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 LRRC37A2A6NM11 1700 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 LRRC37AA6NMS7 1700 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 TTC3P53804 2025 aa4.11□□□□□ -1.75
UBE4A-203ENST00000545354 CTXND1A0A1B0GTU2 59 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 C2CD4DB7Z1M9 353 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 C9JCJ5 164 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 LGALS9O00182 355 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 CCL21O00585 134 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 MRPS12O15235 138 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms