RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 ELOVL1Q9BW60 279 aa13.11□□□□□ -0.31
CHFR-224ENST00000545046 PYGO2Q9BRQ0 406 aa13.11□□□□□ -0.31
CHFR-224ENST00000545046 C5orf52A6NGY3 159 aa13.1□□□□□ -0.31
CHFR-224ENST00000545046 GNG7O60262 68 aa13.1□□□□□ -0.31
CHFR-224ENST00000545046 EGR2P11161 476 aaPredicted RBP13.1□□□□□ -0.31
CHFR-224ENST00000545046 OR10G8Q8NGN5 311 aa13.1□□□□□ -0.31
CHFR-224ENST00000545046 COL12A1Q99715 3063 aa13.1□□□□□ -0.31
CHFR-224ENST00000545046 ABCA2Q9BZC7 2435 aa13.1□□□□□ -0.31
CHFR-224ENST00000545046 IGHV3OR16-10A0A075B7F0 116 aa13.1□□□□□ -0.31
CHFR-224ENST00000545046 TOMM40O96008 361 aa13.1□□□□□ -0.31
CHFR-224ENST00000545046 TRGC2P03986 189 aa13.1□□□□□ -0.31
CHFR-224ENST00000545046 CENPWQ5EE01 88 aa13.1□□□□□ -0.31
CHFR-224ENST00000545046 ZNF329Q86UD4 541 aa13.1□□□□□ -0.31
CHFR-224ENST00000545046 IMMP2LQ96T52 175 aa13.1□□□□□ -0.31
CHFR-224ENST00000545046 TRAV40A0A0B4J280 105 aa13.09□□□□□ -0.31
CHFR-224ENST00000545046 A0A1W2PPQ1 181 aa13.09□□□□□ -0.31
CHFR-224ENST00000545046 NBEAP1P0C6P0 100 aa13.09□□□□□ -0.31
CHFR-224ENST00000545046 AKR1D1P51857 326 aa13.09□□□□□ -0.31
CHFR-224ENST00000545046 TEX38Q6PEX7 206 aa13.09□□□□□ -0.31
CHFR-224ENST00000545046 SGMS2Q8NHU3 365 aa13.09□□□□□ -0.31
CHFR-224ENST00000545046 BLNKQ8WV28 456 aa13.09□□□□□ -0.31
CHFR-224ENST00000545046 NRGNQ92686 78 aa13.09□□□□□ -0.31
CHFR-224ENST00000545046 ZNF48Q96MX3 618 aaPredicted RBP13.09□□□□□ -0.31
CHFR-224ENST00000545046 HSPB9Q9BQS6 159 aa13.09□□□□□ -0.31
CHFR-224ENST00000545046 SLC25A39Q9BZJ4 359 aaPredicted RBP13.09□□□□□ -0.31
CHFR-224ENST00000545046 MRPL27Q9P0M9 148 aaKnown RBP13.09□□□□□ -0.31
CHFR-224ENST00000545046 ABCA1O95477 2261 aa13.09□□□□□ -0.31
CHFR-224ENST00000545046 K7EN84 100 aa13.08□□□□□ -0.31
CHFR-224ENST00000545046 AP4M1O00189 453 aa13.08□□□□□ -0.31
CHFR-224ENST00000545046 MSMBP08118 114 aa13.08□□□□□ -0.31
CHFR-224ENST00000545046 PAX1P15863 534 aa13.08□□□□□ -0.31
CHFR-224ENST00000545046 HIST1H1BP16401 226 aaKnown RBP13.08□□□□□ -0.31
CHFR-224ENST00000545046 RANP62826 216 aaKnown RBP13.08□□□□□ -0.31
CHFR-224ENST00000545046 Q56UQ5 140 aa13.08□□□□□ -0.31
CHFR-224ENST00000545046 TCEAL7Q9BRU2 100 aa13.08□□□□□ -0.31
CHFR-224ENST00000545046 SRD5A3Q9H8P0 318 aa13.08□□□□□ -0.31
CHFR-224ENST00000545046 S4R3C0 116 aa13.08□□□□□ -0.31
CHFR-224ENST00000545046 MYO18BQ8IUG5 2567 aa13.08□□□□□ -0.32
CHFR-224ENST00000545046 PPP5D1E7EU14 171 aa13.08□□□□□ -0.32
CHFR-224ENST00000545046 GGCTO75223 188 aaKnown RBP13.08□□□□□ -0.32
CHFR-224ENST00000545046 GP9P14770 177 aa13.08□□□□□ -0.32
CHFR-224ENST00000545046 CNN1P51911 297 aaKnown RBP13.08□□□□□ -0.32
CHFR-224ENST00000545046 YPEL3P61236 119 aaPredicted RBP13.08□□□□□ -0.32
CHFR-224ENST00000545046 SRSF1Q07955 248 aaKnown RBP eCLIP13.08□□□□□ -0.32
CHFR-224ENST00000545046 CLEC12BQ2HXU8 276 aa13.08□□□□□ -0.32
CHFR-224ENST00000545046 UNQ5815/PRO19632Q6UWF5 114 aa13.08□□□□□ -0.32
CHFR-224ENST00000545046 BTF3L4Q96K17 158 aa13.08□□□□□ -0.32
CHFR-224ENST00000545046 TMUB1Q9BVT8 246 aa13.08□□□□□ -0.32
CHFR-224ENST00000545046 C21orf62Q9NYP8 219 aa13.08□□□□□ -0.32
CHFR-224ENST00000545046 SCGB2A1O75556 95 aa13.07□□□□□ -0.32
CHFR-224ENST00000545046 OR2J3O76001 311 aa13.07□□□□□ -0.32
CHFR-224ENST00000545046 SNRPCP09234 159 aaKnown RBP13.07□□□□□ -0.32
CHFR-224ENST00000545046 TAS2R60P59551 318 aa13.07□□□□□ -0.32
CHFR-224ENST00000545046 LEMD1Q68G75 181 aa13.07□□□□□ -0.32
CHFR-224ENST00000545046 BRD3OSQ6XYD6 125 aa13.07□□□□□ -0.32
CHFR-224ENST00000545046 S100A7AQ86SG5 101 aa13.07□□□□□ -0.32
CHFR-224ENST00000545046 FAM110DQ8TAY7 271 aaPredicted RBP13.07□□□□□ -0.32
CHFR-224ENST00000545046 C7orf69Q9H7B7 122 aa13.07□□□□□ -0.32
CHFR-224ENST00000545046 A1L4Q6 167 aa13.07□□□□□ -0.32
CHFR-224ENST00000545046 UBE2CO00762 179 aa13.07□□□□□ -0.32
CHFR-224ENST00000545046 NDUFB8O95169 186 aa13.07□□□□□ -0.32
CHFR-224ENST00000545046 SLC25A16P16260 332 aa13.07□□□□□ -0.32
CHFR-224ENST00000545046 FOXL1Q12952 345 aa13.07□□□□□ -0.32
CHFR-224ENST00000545046 TMEM14CQ9P0S9 112 aa13.07□□□□□ -0.32
CHFR-224ENST00000545046 PGPA6NDG6 321 aa13.06□□□□□ -0.32
CHFR-224ENST00000545046 B4DSR2 109 aa13.06□□□□□ -0.32
CHFR-224ENST00000545046 PEX7O00628 323 aa13.06□□□□□ -0.32
CHFR-224ENST00000545046 IL4P05112 153 aa13.06□□□□□ -0.32
CHFR-224ENST00000545046 SLC25A5P05141 298 aaKnown RBP13.06□□□□□ -0.32
CHFR-224ENST00000545046 FAM3BP58499 235 aaPredicted RBP13.06□□□□□ -0.32
CHFR-224ENST00000545046 FABP9Q0Z7S8 132 aa13.06□□□□□ -0.32
CHFR-224ENST00000545046 ECSCRQ19T08 205 aa13.06□□□□□ -0.32
CHFR-224ENST00000545046 ZNF491Q8N8L2 437 aa13.06□□□□□ -0.32
CHFR-224ENST00000545046 RNF125Q96EQ8 232 aa13.06□□□□□ -0.32
CHFR-224ENST00000545046 TMEM68Q96MH6 324 aa13.06□□□□□ -0.32
CHFR-224ENST00000545046 MEGF9Q9H1U4 602 aa13.06□□□□□ -0.32
CHFR-224ENST00000545046 FBXL7Q9UJT9 491 aa13.06□□□□□ -0.32
CHFR-224ENST00000545046 WI2-2373I1.2A0A1W2PRP0 233 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 ATP6V0E1O15342 81 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 MYCNOSP40205 109 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 ERVFC1-1P60608 527 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 ZNF600Q6ZNG1 722 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 C5orf56Q8N8D9 126 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 CDC42EP3Q9UKI2 254 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 A0A0U1RQK1 487 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 OR5I1Q13606 314 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 IGF2BP2-AS1Q96M15 143 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 TXN2Q99757 166 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 SHANK2-AS3Q9BTD1 123 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 EPDR1Q9UM22 224 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 MOB4Q9Y3A3 225 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 ZNF462Q96JM2 2506 aa13.05□□□□□ -0.32
CHFR-224ENST00000545046 IGHV4-38-2P0DP08 117 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 HIST1H1EP10412 219 aaKnown RBP13.04□□□□□ -0.32
CHFR-224ENST00000545046 NDUFA6P56556 154 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 VN1R17PQ8TDU5 208 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 H3BRN7 92 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 HIST1H2BKO60814 126 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 GCGP01275 180 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 HIST1H2BJP06899 126 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms