RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 EXPH5Q8NEV8 1989 aa10.57□□□□□ -0.72
MSH6-210ENST00000540021 SPAARA0A1B0GVQ0 90 aa10.57□□□□□ -0.72
MSH6-210ENST00000540021 PRSS1P07477 247 aa10.57□□□□□ -0.72
MSH6-210ENST00000540021 CEACAM8P31997 349 aaPredicted RBP10.57□□□□□ -0.72
MSH6-210ENST00000540021 ORAOV1Q8WV07 137 aa10.57□□□□□ -0.72
MSH6-210ENST00000540021 RPEQ96AT9 228 aa10.57□□□□□ -0.72
MSH6-210ENST00000540021 IGHV3-35A0A0C4DH35 117 aa10.56□□□□□ -0.72
MSH6-210ENST00000540021 SRRM4A7MD48 611 aaKnown RBP10.56□□□□□ -0.72
MSH6-210ENST00000540021 SSBP2P81877 361 aaPredicted RBP10.56□□□□□ -0.72
MSH6-210ENST00000540021 DEFB124Q8NES8 71 aa10.56□□□□□ -0.72
MSH6-210ENST00000540021 C11orf52Q96A22 123 aa10.56□□□□□ -0.72
MSH6-210ENST00000540021 C18orf15Q96N68 181 aa10.56□□□□□ -0.72
MSH6-210ENST00000540021 Q9H3A6 140 aa10.56□□□□□ -0.72
MSH6-210ENST00000540021 LSM4Q9Y4Z0 139 aaKnown RBP10.56□□□□□ -0.72
MSH6-210ENST00000540021 COL6A6A6NMZ7 2263 aa10.56□□□□□ -0.72
MSH6-210ENST00000540021 WISP2O76076 250 aa10.56□□□□□ -0.72
MSH6-210ENST00000540021 P0C879 139 aa10.56□□□□□ -0.72
MSH6-210ENST00000540021 EBLN2Q6P2I7 272 aa10.56□□□□□ -0.72
MSH6-210ENST00000540021 TMEM14BQ9NUH8 114 aa10.56□□□□□ -0.72
MSH6-210ENST00000540021 RNASE2P10153 161 aaKnown RBP10.56□□□□□ -0.72
MSH6-210ENST00000540021 RIPPLY3P57055 190 aa10.56□□□□□ -0.72
MSH6-210ENST00000540021 TMEM108Q6UXF1 575 aa10.56□□□□□ -0.72
MSH6-210ENST00000540021 EXOC3-AS1Q8N2X6 119 aa10.56□□□□□ -0.72
MSH6-210ENST00000540021 AAMDCQ9H7C9 122 aa10.56□□□□□ -0.72
MSH6-210ENST00000540021 KIAA1549Q9HCM3 1950 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 PRR20EP86478 221 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 PRR20CP86479 221 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 PRR20DP86480 221 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 PRR20BP86481 221 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 PRR20AP86496 221 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 TRIP6Q15654 476 aaKnown RBP10.55□□□□□ -0.72
MSH6-210ENST00000540021 CREBBPQ92793 2442 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 IGHV3OR16-8A0A075B7F1 116 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 GLRXP35754 106 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 GTF2H5Q6ZYL4 71 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 MDS2Q8NDY4 140 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 OSR1Q8TAX0 266 aaPredicted RBP10.55□□□□□ -0.72
MSH6-210ENST00000540021 NEUROG1Q92886 237 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 ZC2HC1AQ96GY0 325 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 TMUB1Q9BVT8 246 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 DYSFO75923 2080 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 PPIAL4EA0A075B759 164 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 IGKV1OR2-108A0A075B7D4 117 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 PPIAL4FP0DN26 164 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 RBPMS2Q6ZRY4 209 aaKnown RBP10.55□□□□□ -0.72
MSH6-210ENST00000540021 DEFB123Q8N688 67 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 ZGRF1Q86YA3 2104 aa10.55□□□□□ -0.72
MSH6-210ENST00000540021 IGHV1-69-2A0A0G2JMI3 117 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 TCRBV4S1A1TA0A5B7 111 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 DLX1P56177 255 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 LINC00173Q6ZV60 143 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 CACNG8Q8WXS5 425 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 OR2J3O76001 311 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 CRYABP02511 175 aaKnown RBP10.54□□□□□ -0.72
MSH6-210ENST00000540021 LINC00310P59036 64 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 MRPL52Q86TS9 123 aaKnown RBP10.54□□□□□ -0.72
MSH6-210ENST00000540021 THYN1Q9P016 225 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 ONECUT1Q9UBC0 465 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 SYS1-DBNDD2H3BUS1 97 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 IGKV3-15P01624 115 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 ORM1P02763 201 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 GCSHP23434 173 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 FCGR2BP31994 310 aaPredicted RBP10.54□□□□□ -0.72
MSH6-210ENST00000540021 LOXL3P58215 753 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 C2orf83Q53S99 150 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 SAPCD1Q5SSQ6 148 aa10.54□□□□□ -0.72
MSH6-210ENST00000540021 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.54□□□□□ -0.72
MSH6-210ENST00000540021 NCBP2LA6PVI3 153 aaKnown RBP10.53□□□□□ -0.72
MSH6-210ENST00000540021 H3BUT2 72 aa10.53□□□□□ -0.72
MSH6-210ENST00000540021 GPR183P32249 361 aa10.53□□□□□ -0.72
MSH6-210ENST00000540021 ZNF329Q86UD4 541 aa10.53□□□□□ -0.72
MSH6-210ENST00000540021 OR10AG1Q8NH19 301 aa10.53□□□□□ -0.72
MSH6-210ENST00000540021 MRPL27Q9P0M9 148 aaKnown RBP10.53□□□□□ -0.72
MSH6-210ENST00000540021 RPUSD1Q9UJJ7 312 aaKnown RBP10.53□□□□□ -0.72
MSH6-210ENST00000540021 A6NDN8 102 aa10.53□□□□□ -0.72
MSH6-210ENST00000540021 SMIM27A0A1W2PRY6 76 aa10.53□□□□□ -0.72
MSH6-210ENST00000540021 GNG7O60262 68 aa10.53□□□□□ -0.72
MSH6-210ENST00000540021 SLC25A2Q9BXI2 301 aa10.53□□□□□ -0.72
MSH6-210ENST00000540021 NCKAP5O14513 1909 aa10.53□□□□□ -0.72
MSH6-210ENST00000540021 A0A1B0GUT8 65 aa10.52□□□□□ -0.72
MSH6-210ENST00000540021 C7orf71A4D174 169 aa10.52□□□□□ -0.72
MSH6-210ENST00000540021 F2RL2O00254 374 aa10.52□□□□□ -0.72
MSH6-210ENST00000540021 C17orf58Q2M2W7 97 aa10.52□□□□□ -0.72
MSH6-210ENST00000540021 FBXL15Q9H469 300 aa10.52□□□□□ -0.72
MSH6-210ENST00000540021 PEF1Q9UBV8 284 aaKnown RBP10.52□□□□□ -0.72
MSH6-210ENST00000540021 MRPS16Q9Y3D3 137 aaKnown RBP10.52□□□□□ -0.72
MSH6-210ENST00000540021 CEP192Q8TEP8 1941 aa10.52□□□□□ -0.72
MSH6-210ENST00000540021 TWIST1Q15672 202 aa10.52□□□□□ -0.73
MSH6-210ENST00000540021 PNKDQ8N490 385 aa10.52□□□□□ -0.73
MSH6-210ENST00000540021 GUCD1Q96NT3 240 aa10.52□□□□□ -0.73
MSH6-210ENST00000540021 ZNF257Q9Y2Q1 563 aa10.52□□□□□ -0.73
MSH6-210ENST00000540021 ZFHX2Q9C0A1 2572 aaPredicted RBP10.52□□□□□ -0.73
MSH6-210ENST00000540021 CKS2P33552 79 aa10.52□□□□□ -0.73
MSH6-210ENST00000540021 TMEM249Q2WGJ8 235 aa10.52□□□□□ -0.73
MSH6-210ENST00000540021 PRRG2O14669 202 aa10.52□□□□□ -0.73
MSH6-210ENST00000540021 IGHV1-46P01743 117 aa10.51□□□□□ -0.73
MSH6-210ENST00000540021 DIAPH2-AS1Q14236 149 aa10.51□□□□□ -0.73
MSH6-210ENST00000540021 C1orf229Q6ZS94 237 aaPredicted RBP10.51□□□□□ -0.73
MSH6-210ENST00000540021 Q8N7P7 452 aa10.51□□□□□ -0.73
MSH6-210ENST00000540021 ST20Q9HBF5 79 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms