RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 C3orf56Q8N813 242 aa13.83□□□□□ -0.2
SCARB1-205ENST00000538291 RNF166Q96A37 237 aaPredicted RBP13.83□□□□□ -0.2
SCARB1-205ENST00000538291 IGKV1D-8A0A087WSZ0 117 aa13.83□□□□□ -0.2
SCARB1-205ENST00000538291 USMG5Q96IX5 58 aa13.83□□□□□ -0.2
SCARB1-205ENST00000538291 C1QTNF4Q9BXJ3 329 aa13.83□□□□□ -0.2
SCARB1-205ENST00000538291 PMS2P5A8MQ11 134 aa13.83□□□□□ -0.2
SCARB1-205ENST00000538291 NAPSAO96009 420 aa13.83□□□□□ -0.2
SCARB1-205ENST00000538291 C9orf139Q6ZV77 190 aa13.83□□□□□ -0.2
SCARB1-205ENST00000538291 PSPNO60542 156 aa13.83□□□□□ -0.2
SCARB1-205ENST00000538291 RPL36AP83881 106 aaKnown RBP13.83□□□□□ -0.2
SCARB1-205ENST00000538291 KLHL30-AS1Q8NEE0 82 aa13.83□□□□□ -0.2
SCARB1-205ENST00000538291 RPL36ALQ969Q0 106 aaKnown RBP13.83□□□□□ -0.2
SCARB1-205ENST00000538291 NEUROG3Q9Y4Z2 214 aa13.83□□□□□ -0.2
SCARB1-205ENST00000538291 SERF1AO75920 110 aa13.82□□□□□ -0.2
SCARB1-205ENST00000538291 TREML4Q6UXN2 200 aa13.82□□□□□ -0.2
SCARB1-205ENST00000538291 CHTOPQ9Y3Y2 248 aaKnown RBP13.82□□□□□ -0.2
SCARB1-205ENST00000538291 NRN1Q9NPD7 142 aa13.82□□□□□ -0.2
SCARB1-205ENST00000538291 TRAV5A0A0B4J249 113 aa13.82□□□□□ -0.2
SCARB1-205ENST00000538291 EVI2AP22794 236 aa13.82□□□□□ -0.2
SCARB1-205ENST00000538291 CKS1BP61024 79 aa13.82□□□□□ -0.2
SCARB1-205ENST00000538291 TRGV1A0A0A0MS02 117 aa13.82□□□□□ -0.2
SCARB1-205ENST00000538291 TMEM8BA6NDV4 472 aa13.82□□□□□ -0.2
SCARB1-205ENST00000538291 RPL35AP18077 110 aaKnown RBP13.82□□□□□ -0.2
SCARB1-205ENST00000538291 PAX2Q02962 417 aa13.82□□□□□ -0.2
SCARB1-205ENST00000538291 TSKUQ8WUA8 353 aa13.82□□□□□ -0.2
SCARB1-205ENST00000538291 SELENOKQ9Y6D0 94 aa13.82□□□□□ -0.2
SCARB1-205ENST00000538291 IGKV2-40A0A087WW87 121 aaPredicted RBP13.81□□□□□ -0.2
SCARB1-205ENST00000538291 IGKV2D-40P01614 121 aaPredicted RBP13.81□□□□□ -0.2
SCARB1-205ENST00000538291 LCNL1Q6ZST4 164 aa13.81□□□□□ -0.2
SCARB1-205ENST00000538291 MTURNQ8N3F0 131 aa13.81□□□□□ -0.2
SCARB1-205ENST00000538291 TYMSP04818 313 aa13.81□□□□□ -0.2
SCARB1-205ENST00000538291 OCC1Q8TAD7 63 aa13.81□□□□□ -0.2
SCARB1-205ENST00000538291 PHLDA1Q8WV24 401 aaPredicted RBP13.81□□□□□ -0.2
SCARB1-205ENST00000538291 TDGF1P3P51864 188 aa13.81□□□□□ -0.2
SCARB1-205ENST00000538291 MORN3Q6PF18 240 aaPredicted RBP13.81□□□□□ -0.2
SCARB1-205ENST00000538291 SLC25A39Q9BZJ4 359 aaPredicted RBP13.81□□□□□ -0.2
SCARB1-205ENST00000538291 SPCS1Q9Y6A9 102 aa13.81□□□□□ -0.2
SCARB1-205ENST00000538291 J3QRE1 110 aa13.81□□□□□ -0.2
SCARB1-205ENST00000538291 IGHG3P01860 377 aa13.81□□□□□ -0.2
SCARB1-205ENST00000538291 S100A7L2Q5SY68 101 aa13.81□□□□□ -0.2
SCARB1-205ENST00000538291 LINC00158P58513 81 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 BUB1B-PAK6H3BSN5 160 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 ASCL4Q6XD76 172 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 PGPEP1LA6NFU8 196 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 ACTL10Q5JWF8 245 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 TRGV9Q99603 122 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 RALGAPA1Q6GYQ0 2036 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 PATJQ8NI35 1801 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 CACNA1DQ01668 2161 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 TRAV2A0A0B4J234 112 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 SRRM4A7MD48 611 aaKnown RBP13.8□□□□□ -0.2
SCARB1-205ENST00000538291 PSCAO43653 123 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 GAFA1Q96PS6 74 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 RIF1Q5UIP0 2472 aaKnown RBP13.8□□□□□ -0.2
SCARB1-205ENST00000538291 ADMP35318 185 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 TMEM170AQ8WVE7 144 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 SCRT1Q9BWW7 348 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 GGTLC1Q9BX51 225 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 BPESC1Q9GZL8 116 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 CRIM1Q9NZV1 1036 aa13.8□□□□□ -0.2
SCARB1-205ENST00000538291 TRAV12-3A0A0B4J271 114 aa13.79□□□□□ -0.2
SCARB1-205ENST00000538291 NDUFS8O00217 210 aa13.79□□□□□ -0.2
SCARB1-205ENST00000538291 A8MXK9 166 aa13.79□□□□□ -0.2
SCARB1-205ENST00000538291 ZNF138P52744 262 aa13.79□□□□□ -0.2
SCARB1-205ENST00000538291 TMEM95Q3KNT9 176 aa13.79□□□□□ -0.2
SCARB1-205ENST00000538291 LINC00518Q8N0U6 118 aa13.79□□□□□ -0.2
SCARB1-205ENST00000538291 FAM169BQ8N8A8 192 aa13.79□□□□□ -0.2
SCARB1-205ENST00000538291 H0YJW9 148 aa13.79□□□□□ -0.2
SCARB1-205ENST00000538291 LY6G6FQ5SQ64 297 aa13.79□□□□□ -0.2
SCARB1-205ENST00000538291 SP5Q6BEB4 398 aaPredicted RBP13.79□□□□□ -0.2
SCARB1-205ENST00000538291 IGKV1-27A0A075B6S5 117 aa13.79□□□□□ -0.2
SCARB1-205ENST00000538291 FAM223BA6NKX1 122 aa13.79□□□□□ -0.2
SCARB1-205ENST00000538291 ATP5L2Q7Z4Y8 100 aa13.79□□□□□ -0.2
SCARB1-205ENST00000538291 FAM223AQ8IWN6 122 aa13.79□□□□□ -0.2
SCARB1-205ENST00000538291 MBD3L1Q8WWY6 194 aa13.79□□□□□ -0.2
SCARB1-205ENST00000538291 H0YIZ8 118 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 ZNF876PQ49A33 203 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 TMEM155Q4W5P6 130 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 ZNF329Q86UD4 541 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 OR5A1Q8NGJ0 315 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 ZNF236Q9UL36 1845 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 A0A0U1RRA0 63 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 BTCP35070 178 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 SRSF6Q13247 344 aaKnown RBP13.78□□□□□ -0.2
SCARB1-205ENST00000538291 KLF17Q5JT82 389 aaPredicted RBP13.78□□□□□ -0.2
SCARB1-205ENST00000538291 C5orf30Q96GV9 206 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 LINC00477Q96M19 166 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 JPT2Q9H910 190 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 ARHGEF17Q96PE2 2063 aaPredicted RBP13.78□□□□□ -0.2
SCARB1-205ENST00000538291 INSP01308 110 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 LHFPL4Q7Z7J7 247 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 BMPERQ8N8U9 685 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 CST9LQ9H4G1 147 aa13.78□□□□□ -0.2
SCARB1-205ENST00000538291 COL8A2P25067 703 aa13.77□□□□□ -0.2
SCARB1-205ENST00000538291 GNB1LQ9BYB4 327 aa13.77□□□□□ -0.2
SCARB1-205ENST00000538291 FCN3O75636 299 aa13.77□□□□□ -0.2
SCARB1-205ENST00000538291 IGKCP01834 107 aa13.77□□□□□ -0.2
SCARB1-205ENST00000538291 NDPQ00604 133 aa13.77□□□□□ -0.21
SCARB1-205ENST00000538291 EXOC3-AS1Q8N2X6 119 aa13.77□□□□□ -0.21
SCARB1-205ENST00000538291 OR2K2Q8NGT1 345 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms