RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 SAMD10Q9BYL1 202 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 DAZ3Q9NR90 486 aaKnown RBP0.96□□□□□ -2.26
KNL1-211ENST00000533001 IMPAD1Q9NX62 359 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 CKLFQ9UBR5 152 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 FBXL17Q9UF56 701 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 EBAG9O00559 213 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 OCM2P0CE71 109 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 NQO2P16083 231 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 SERPINB10P48595 397 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 HSPE1P61604 102 aaKnown RBP0.96□□□□□ -2.26
KNL1-211ENST00000533001 TMEM267Q0VDI3 215 aaPredicted RBP0.96□□□□□ -2.26
KNL1-211ENST00000533001 MLLT11Q13015 90 aaPredicted RBP0.96□□□□□ -2.26
KNL1-211ENST00000533001 P2RY14Q15391 338 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 MAPRE2Q15555 327 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 TNXAQ16473 311 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 C20orf203Q8NBC4 194 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 C9orf85Q96MD7 179 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 VGLL1Q99990 258 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 NAA50Q9GZZ1 169 aaKnown RBP0.96□□□□□ -2.26
KNL1-211ENST00000533001 RIMS4Q9H426 269 aaPredicted RBP0.96□□□□□ -2.26
KNL1-211ENST00000533001 LRRC42Q9Y546 428 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 TRAV14DV4A0A0A6YYC5 116 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 FUOMA2VDF0 154 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 TNFRSF6BO95407 300 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 PRSS1P07477 247 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 GADD45AP24522 165 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 HSPA13P48723 471 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 TIGITQ495A1 244 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 ASB16-AS1Q495Z4 193 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 TMEM41BQ5BJD5 291 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 IBA57Q5T440 356 aaKnown RBP0.96□□□□□ -2.26
KNL1-211ENST00000533001 FOXI2Q6ZQN5 318 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 SPAG16Q8N0X2 631 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 OR1L8Q8NGR8 309 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 TSNAXQ99598 290 aaKnown RBP0.96□□□□□ -2.26
KNL1-211ENST00000533001 S100A14Q9HCY8 104 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 RAB9BQ9NP90 201 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 NKIRAS1Q9NYS0 192 aa0.96□□□□□ -2.26
KNL1-211ENST00000533001 DAPL1A0PJW8 107 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 ZNF98A6NK75 572 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 H3BRN7 92 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 CRYGDP07320 174 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 SPART-AS1P0CW21 52 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 ATP5G2Q06055 141 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 SPINK13Q1W4C9 94 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 IZUMO2Q6UXV1 221 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 KCTD9Q7L273 389 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 OR8A1Q8NGG7 326 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 COMMD9Q9P000 198 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 RCL1Q9Y2P8 373 aaKnown RBP0.95□□□□□ -2.26
KNL1-211ENST00000533001 A0A087WYN8 130 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 LOC102723971A0A1B0GUV8 181 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 NXPH4O95158 308 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 HPRT1P00492 218 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 UBBP0CG47 229 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 OR13C7P0DN81 318 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 ZNF415Q09FC8 603 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 IFFO1Q0D2I5 559 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 SLC16A13Q7RTY0 426 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 OR10G9Q8NGN4 311 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 TMEM263Q8WUH6 116 aaKnown RBP0.95□□□□□ -2.26
KNL1-211ENST00000533001 IL1F10Q8WWZ1 152 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 LSM10Q969L4 123 aaKnown RBP0.95□□□□□ -2.26
KNL1-211ENST00000533001 SLC25A46Q96AG3 418 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 SLIRPQ9GZT3 109 aaKnown RBP0.95□□□□□ -2.26
KNL1-211ENST00000533001 PEMTQ9UBM1 199 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 DHDHQ9UQ10 334 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 MT1BP07438 61 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 RPSAP08865 295 aaKnown RBP0.95□□□□□ -2.26
KNL1-211ENST00000533001 TPRXLQ17RH7 258 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 ANKRD39Q53RE8 183 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 C1orf194Q5T5A4 169 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 LIPKQ5VXJ0 399 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 TRAPPC6BQ86SZ2 158 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 OR4D5Q8NGN0 318 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 H0YIZ8 118 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 SULT1C2O00338 296 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 SDC2P34741 201 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 FXYD7P58549 80 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 SFXN4Q6P4A7 337 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 CROCCP2Q86T23 111 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.95□□□□□ -2.26
KNL1-211ENST00000533001 C15orf53Q8NAA6 179 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 PTH2Q96A98 100 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 ODF3Q96PU9 254 aa0.95□□□□□ -2.26
KNL1-211ENST00000533001 FAM32AQ9Y421 112 aaKnown RBP0.95□□□□□ -2.26
KNL1-211ENST00000533001 KRTAP16-1A8MUX0 517 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 K7EP13 123 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 GYG2O15488 501 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 TNFAIP8O95379 198 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 GUCA1AP43080 201 aaPredicted RBP0.94□□□□□ -2.26
KNL1-211ENST00000533001 PSMB3P49720 205 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 MRPL28Q13084 256 aaKnown RBP0.94□□□□□ -2.26
KNL1-211ENST00000533001 ST6GAL2Q96JF0 529 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 ADI1Q9BV57 179 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 MRPL32Q9BYC8 188 aaKnown RBP0.94□□□□□ -2.26
KNL1-211ENST00000533001 PALMDQ9NP74 551 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 GLS2Q9UI32 602 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 UQCRHLA0A096LP55 91 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 IGKV3D-20A0A0C4DH25 116 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms