RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 C20orf24Q9BUV8 137 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 MRPL20Q9BYC9 149 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 GAL3ST2Q9H3Q3 398 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 RPS10P5Q9NQ39 176 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 HEYLQ9NQ87 328 aaPredicted RBP5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 FOXA2Q9Y261 457 aaPredicted RBP5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 WDR83OSQ9Y284 106 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 PSMB11A5LHX3 300 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 MAP1LC3B2A6NCE7 125 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 J3QR06 171 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 M0R036 132 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 HSPB1P04792 205 aaKnown RBP5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 HOXA1P49639 335 aaPredicted RBP5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 INSL3P51460 131 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 RPP30P78346 268 aaKnown RBP5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 DLK1P80370 383 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 DIAPH2-AS1Q14236 149 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 SOHLH1Q5JUK2 328 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 FAM122CQ6P4D5 195 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 ZNF429Q86V71 674 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 ST6GALNAC6Q969X2 333 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 MAP1LC3BQ9GZQ8 125 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 TMPRSS5Q9H3S3 457 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 SMCO4Q9NRQ5 59 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 TMEM14BQ9NUH8 114 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 SLC39A9Q9NUM3 307 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 GNG13Q9P2W3 67 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 PITPNC1Q9UKF7 332 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 OR51B2Q9Y5P1 312 aa5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 PUS1Q9Y606 427 aaKnown RBP eCLIP5.57□□□□□ -1.52
CTNNA1-227ENST00000521387 CTXND1A0A1B0GTU2 59 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 TEX50A0A1B0GTY4 177 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 CXorf65A6NEN9 183 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 NUPR2A6NF83 97 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 ZFP92A6NM28 416 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 H0YJW9 148 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 H3BQ15 152 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 HMGB3O15347 200 aaKnown RBP5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 KBTBD11O94819 623 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 YIF1AO95070 293 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 IGKV1-16P04430 117 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 SAA1P0DJI8 122 aaPredicted RBP5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 BCL2P10415 239 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 CD1BP29016 333 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 REG1BP48304 166 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 CEBPGP53567 150 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 RTL8BQ17RB0 113 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 SMUG1Q53HV7 270 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 ASPHD1Q5U4P2 390 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 FAM90A2PQ658T7 463 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 LCNL1Q6ZST4 164 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 CYB561D1Q8N8Q1 229 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 OR10G4Q8NGN3 311 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 OR10G9Q8NGN4 311 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 OR10G7Q8NGN6 311 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 NPCDR1Q9BY65 106 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 ACTR3CQ9C0K3 210 aaPredicted RBP5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 SLC25A22Q9H936 323 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 PRNDQ9UKY0 176 aa5.56□□□□□ -1.52
CTNNA1-227ENST00000521387 A0A087X0M5 115 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 A0A1B0GX30 115 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 A0A1W2PPH5 198 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 SMCO3A2RU48 225 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 ZNF727A8MUV8 499 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 C17orf112F2Z3M2 114 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 H7C2Y5 167 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 CA2P00918 260 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 MBP02144 154 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 APOA2P02652 100 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 IFNA4P05014 189 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 RBMY1CP0DJD4 496 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 INAFM2P0DMQ5 153 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 IGHV1-8P0DP01 117 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 NPY1RP25929 384 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 RAB11AP62491 216 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 ACOT6Q3I5F7 207 aaPredicted RBP5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 TMEM177Q53S58 311 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 GCSAMLQ5JQS6 135 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 LINC00322Q6ZN03 302 aaPredicted RBP5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 C15orf54Q8N8G6 183 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 ZNF709Q8N972 641 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 C8orf31Q8N9H6 132 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 OR5AN1Q8NGI8 311 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 RAB24Q969Q5 203 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 HIST1H2BAQ96A08 127 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 NOL4LQ96MY1 436 aaPredicted RBP5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 YPEL4Q96NS1 127 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 MGST2Q99735 147 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 GGACTQ9BVM4 153 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 HINT2Q9BX68 163 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 TUBA4BQ9H853 241 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 ENY2Q9NPA8 101 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 BET1LQ9NYM9 111 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 VAX2Q9UIW0 290 aa5.55□□□□□ -1.52
CTNNA1-227ENST00000521387 A0A1W2PPE2 198 aa5.54□□□□□ -1.52
CTNNA1-227ENST00000521387 CGB1A6NKQ9 187 aa5.54□□□□□ -1.52
CTNNA1-227ENST00000521387 E7EUB6 86 aa5.54□□□□□ -1.52
CTNNA1-227ENST00000521387 CYB5BO43169 146 aa5.54□□□□□ -1.52
CTNNA1-227ENST00000521387 MPDU1O75352 247 aa5.54□□□□□ -1.52
CTNNA1-227ENST00000521387 IFNA1P01562 189 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms