RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 BIN3Q9NQY0 253 aa2.08□□□□□ -2.08
HMGB1P46-201ENST00000520062 SPANXCQ9NY87 97 aa2.08□□□□□ -2.08
HMGB1P46-201ENST00000520062 RTL9Q8NET4 1388 aa2.08□□□□□ -2.08
HMGB1P46-201ENST00000520062 MDC1Q14676 2089 aaKnown RBP2.08□□□□□ -2.08
HMGB1P46-201ENST00000520062 PPIP5K1Q6PFW1 1433 aa2.08□□□□□ -2.08
HMGB1P46-201ENST00000520062 KIF1BO60333 1816 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 MRC2Q9UBG0 1479 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 SYNMO15061 1565 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 PPP5D1E7EU14 171 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 HMGB3O15347 200 aaKnown RBP2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 CYB5BO43169 146 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 IFNA7P01567 189 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 SHBGP04278 402 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 CRYGAP11844 174 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 OGNP20774 298 aaKnown RBP2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 ATP5G3P48201 142 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 TCTAP57738 103 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 DEFA3P59666 94 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 RPL13AP3Q6NVV1 102 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 C4orf22Q6V702 233 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 RPS19BP1Q86WX3 136 aaKnown RBP2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 OR8D4Q8NGM9 314 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 HOPXQ9BPY8 73 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 NHP2Q9NX24 153 aaKnown RBP2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 RGS12O14924 1447 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 ZNF518AQ6AHZ1 1483 aa2.07□□□□□ -2.08
HMGB1P46-201ENST00000520062 KIAA2026Q5HYC2 2103 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 PVALEFA0A1B0GWK0 134 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 C7orf71A4D174 169 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 CLDN25C9JDP6 229 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 PFDN1O60925 122 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 ATG12O94817 140 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 IFNA1P01562 189 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 CRPP02741 224 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 SRIP30626 198 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 SDC4P31431 198 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 PSPHP78330 225 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 SPANXN5Q5MJ07 72 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 FP248Q71RG6 208 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 ANGPTL5Q86XS5 388 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 LINC00471Q8N535 108 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 SKA2Q8WVK7 121 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 C1orf54Q8WWF1 131 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 ADAT3Q96EY9 351 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 Q96M85 177 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 PFDN5Q99471 154 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 HIST1H2BLQ99880 126 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 TMEM138Q9NPI0 162 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 MYH7P12883 1935 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 PCNX2A6NKB5 2137 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 CNTLNQ9NXG0 1405 aa2.06□□□□□ -2.08
HMGB1P46-201ENST00000520062 GBF1Q92538 1859 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 PTPRBP23467 1997 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 MYH9P35579 1960 aaKnown RBP2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 MYH11P35749 1972 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 ARPC5O15511 151 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 TPST1O60507 370 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 IFNGP01579 166 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 OR10J4P0C629 311 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 UBBP0CG47 229 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 S100GP29377 79 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 ZNF846Q147U1 533 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 RRN3P1Q2M238 152 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 OR13D1Q8NGV5 346 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 ZNF563Q8TA94 476 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 WFDC5Q8TCV5 224 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 SERPINI1Q99574 410 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 TCEAL7Q9BRU2 100 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 C2orf88Q9BSF0 95 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 ARHGEF10O15013 1369 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 GLI3P10071 1580 aa2.05□□□□□ -2.08
HMGB1P46-201ENST00000520062 IGKV1-9A0A0C4DH69 117 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 TRBV6-5A0A0K0K1A5 114 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 TMEM212A6NML5 194 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 C1orf196B1AJZ1 125 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 FAM25AB3EWG3 89 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 FAM25CB3EWG5 89 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 FAM25GB3EWG6 89 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 ATP6V1G2-DDX39BF2Z307 99 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 K7EP13 123 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 GPR31O00270 319 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 SPI1P17947 270 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 FKBP2P26885 142 aaKnown RBP2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 TAS2R41P59536 307 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 EIF5AP63241 154 aaKnown RBP2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 MED1Q15648 1581 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 TOMM20LQ6UXN7 152 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 GRINAQ7Z429 371 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 OR4K15Q8NH41 348 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 TMEM203Q969S6 136 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 TPT1P8Q9HAU6 139 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 TAS2R4Q9NYW5 299 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 GSKIPQ9P0R6 139 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 PRNDQ9UKY0 176 aa2.04□□□□□ -2.08
HMGB1P46-201ENST00000520062 FANCMQ8IYD8 2048 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 YTHDC2Q9H6S0 1430 aaKnown RBP2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 RFX7Q2KHR2 1363 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 IGKV1D-42A0A075B6H8 117 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 CCDC160A6NGH7 325 aa2.03□□□□□ -2.08
HMGB1P46-201ENST00000520062 ARL5CA6NH57 179 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 450.4 ms