RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 EHFQ9NZC4 300 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 MAP1AP78559 2803 aaPredicted RBP4□□□□□ -1.77
TRAPPC11-208ENST00000511955 SPTBN1Q01082 2364 aaKnown RBP4□□□□□ -1.77
TRAPPC11-208ENST00000511955 TRAV14DV4A0A0A6YYC5 116 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 TRGV5A0A0B4J1U4 118 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 TRDV1A0A1B0GX56 115 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 WNT9BO14905 357 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 MPPED1O15442 326 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 TRGC2P03986 189 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 IGHV4-31P0DP07 118 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 PLA2G2AP14555 144 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 PGAM2P15259 253 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 GRB2P62993 217 aaKnown RBP4□□□□□ -1.77
TRAPPC11-208ENST00000511955 CATR1Q13166 79 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 TMEM183BQ1AE95 376 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 MIDNQ504T8 468 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZGRF1Q86YA3 2104 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 RPRMLQ8N4K4 120 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 STPG4Q8N801 248 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 LRRC29Q8WV35 223 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 FRZBQ92765 325 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 FAM19A4Q96LR4 140 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 CIB3Q96Q77 187 aaPredicted RBP4□□□□□ -1.77
TRAPPC11-208ENST00000511955 TSPAN32Q96QS1 320 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 KRTAP4-8Q9BYQ9 185 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 FKBP11Q9NYL4 201 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 RPUSD1Q9UJJ7 312 aaKnown RBP4□□□□□ -1.77
TRAPPC11-208ENST00000511955 PAM16Q9Y3D7 125 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 DIDO1Q9BTC0 2240 aaKnown RBP4□□□□□ -1.77
TRAPPC11-208ENST00000511955 PCNX1Q96RV3 2341 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 HIVEP3Q5T1R4 2406 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 CSMD1Q96PZ7 3565 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 POLEQ07864 2286 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 A0A087WWC5 75 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 TRBV5-3A0A0A0MS03 114 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 TRAV5A0A0B4J249 113 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 FAM220BPB1ANY3 271 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 H7BYZ3 331 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 J3QKU1 62 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 K7EPK0 472 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 OVOL1O14753 267 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 PGLYRP1O75594 196 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 UBL3O95164 117 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 SPINK8P0C7L1 97 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 ATP5G3P48201 142 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 CAV3P56539 151 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 H2BFSP57053 126 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 UBE2NP61088 152 aaKnown RBP3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 PAX8Q06710 450 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 ARFRP1Q13795 201 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 CENPWQ5EE01 88 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 MRPL2Q5T653 305 aaKnown RBP3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 Q5XG85 94 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 LINC00114Q6XXX2 140 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 FAM71E2Q8N5Q1 922 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF563Q8TA94 476 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 TMEM255BQ8WV15 326 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 TMEM230Q96A57 120 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF524Q96C55 264 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 TSSK6Q9BXA6 273 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 PBOV1Q9GZY1 135 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 SPRR3Q9UBC9 169 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 OR2W1Q9Y3N9 320 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 NCKAP5O14513 1909 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 ESPL1Q14674 2120 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 SHANK1Q9Y566 2161 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 PTPN13Q12923 2485 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 LRBAP50851 2863 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 CSMD2Q7Z408 3487 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 FREM3P0C091 2139 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 IGKV1D-8A0A087WSZ0 117 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 A0A1B0GXF2 115 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 LINC01619G3V211 115 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 H0YJW9 148 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 XKRYO14609 159 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 FCGR3AP08637 254 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 CXCL1P09341 107 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 PPIBP23284 216 aaKnown RBP3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 SNCAP37840 140 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF83P51522 516 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 TAS2R19P59542 299 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 SRPXP78539 464 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 HLA-DRB3P79483 266 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 ELOBQ15370 118 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 TTC32Q5I0X7 151 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 TCF23Q7RTU1 214 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 ATP5L2Q7Z4Y8 100 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 LY6G5BQ8NDX9 201 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 OR2M3Q8NG83 312 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 RFESDQ8TAC1 157 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 SLC25A40Q8TBP6 338 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 TMEM106AQ96A25 262 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 WFDC6Q9BQY6 131 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 POLR2J3Q9H1A7 115 aaKnown RBP3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 WASHC3Q9Y3C0 194 aa3.99□□□□□ -1.77
TRAPPC11-208ENST00000511955 A0A0B4J2A0 478 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF705FA8MVS1 300 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 SHISA9B4DS77 424 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 UMAD1C9J7I0 102 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms