RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 ASCL2Q99929 193 aa11.96□□□□□ -0.5
ATP2C1-214ENST00000508532 TMEM14BQ9NUH8 114 aa11.96□□□□□ -0.5
ATP2C1-214ENST00000508532 INSIG2Q9Y5U4 225 aa11.96□□□□□ -0.5
ATP2C1-214ENST00000508532 SS18L1O75177 396 aaPredicted RBP11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 C11orf53Q8IXP5 236 aa11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 THYN1Q9P016 225 aa11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 SPTAN1Q13813 2472 aaKnown RBP11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 C10orf142B7Z368 130 aa11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 P0C879 139 aa11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 NEUROG1Q92886 237 aa11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 PLXNB1O43157 2135 aa11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 C2orf83Q53S99 150 aa11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 TMUB1Q9BVT8 246 aa11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 TRAV30A0A087WSZ9 112 aa11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 A0A1B0GUT8 65 aa11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 TCRBV4S1A1TA0A5B7 111 aa11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 RNASE2P10153 161 aaKnown RBP11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 ATP5IP56385 69 aaPredicted RBP11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 PLP1P60201 277 aa11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 C18orf15Q96N68 181 aa11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 MEGF9Q9H1U4 602 aa11.95□□□□□ -0.5
ATP2C1-214ENST00000508532 FAM90A1Q86YD7 464 aa11.94□□□□□ -0.5
ATP2C1-214ENST00000508532 CIARTQ8N365 385 aaPredicted RBP11.94□□□□□ -0.5
ATP2C1-214ENST00000508532 SMIM27A0A1W2PRY6 76 aa11.94□□□□□ -0.5
ATP2C1-214ENST00000508532 FXYD7P58549 80 aa11.94□□□□□ -0.5
ATP2C1-214ENST00000508532 TMEM108Q6UXF1 575 aa11.94□□□□□ -0.5
ATP2C1-214ENST00000508532 KIR3DL3Q8N743 410 aa11.94□□□□□ -0.5
ATP2C1-214ENST00000508532 S4R3C0 116 aa11.94□□□□□ -0.5
ATP2C1-214ENST00000508532 TRANK1O15050 2925 aa11.94□□□□□ -0.5
ATP2C1-214ENST00000508532 IGHV2-26A0A0B4J1V2 119 aa11.94□□□□□ -0.5
ATP2C1-214ENST00000508532 KIR2DL2P43627 348 aaPredicted RBP11.94□□□□□ -0.5
ATP2C1-214ENST00000508532 ZNF257Q9Y2Q1 563 aa11.94□□□□□ -0.5
ATP2C1-214ENST00000508532 SCGB2A1O75556 95 aa11.93□□□□□ -0.5
ATP2C1-214ENST00000508532 ORM1P02763 201 aa11.93□□□□□ -0.5
ATP2C1-214ENST00000508532 PAX1P15863 534 aa11.93□□□□□ -0.5
ATP2C1-214ENST00000508532 GLRXP35754 106 aa11.93□□□□□ -0.5
ATP2C1-214ENST00000508532 PROP1O75360 226 aa11.93□□□□□ -0.5
ATP2C1-214ENST00000508532 TP73-AS1Q9UF72 201 aa11.93□□□□□ -0.5
ATP2C1-214ENST00000508532 PPIAL4EA0A075B759 164 aa11.93□□□□□ -0.5
ATP2C1-214ENST00000508532 M0R296 226 aa11.93□□□□□ -0.5
ATP2C1-214ENST00000508532 OR2J3O76001 311 aa11.93□□□□□ -0.5
ATP2C1-214ENST00000508532 PPIAL4FP0DN26 164 aa11.93□□□□□ -0.5
ATP2C1-214ENST00000508532 CKS2P33552 79 aa11.93□□□□□ -0.5
ATP2C1-214ENST00000508532 MORN5Q5VZ52 161 aa11.93□□□□□ -0.5
ATP2C1-214ENST00000508532 ZNF329Q86UD4 541 aa11.93□□□□□ -0.5
ATP2C1-214ENST00000508532 CST9LQ9H4G1 147 aa11.92□□□□□ -0.5
ATP2C1-214ENST00000508532 TMPRSS3P57727 454 aa11.92□□□□□ -0.5
ATP2C1-214ENST00000508532 HCFC1P51610 2035 aa11.92□□□□□ -0.5
ATP2C1-214ENST00000508532 PCNX2A6NKB5 2137 aa11.92□□□□□ -0.5
ATP2C1-214ENST00000508532 GAGE12BA1L429 117 aa11.92□□□□□ -0.5
ATP2C1-214ENST00000508532 ESDP10768 282 aa11.92□□□□□ -0.5
ATP2C1-214ENST00000508532 LINC00310P59036 64 aa11.92□□□□□ -0.5
ATP2C1-214ENST00000508532 EXOC3-AS1Q8N2X6 119 aa11.92□□□□□ -0.5
ATP2C1-214ENST00000508532 FCGR2BP31994 310 aaPredicted RBP11.92□□□□□ -0.5
ATP2C1-214ENST00000508532 TWIST1Q15672 202 aa11.92□□□□□ -0.5
ATP2C1-214ENST00000508532 RPUSD1Q9UJJ7 312 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-214ENST00000508532 A1L4Q6 167 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 SRRM4A7MD48 611 aaKnown RBP11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 F2RL2O00254 374 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 GNG7O60262 68 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 RASL11AQ6T310 242 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 ATP5L2Q7Z4Y8 100 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 TMEM189A5PLL7 270 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 J3QR89 54 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 MMP23AO75900 390 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 HIST1H1AQ02539 215 aaPredicted RBP11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 LINC00173Q6ZV60 143 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 CFAP54Q96N23 3096 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 NDFIP1Q9BT67 221 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 SCNM1Q9BWG6 230 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 LAMA1P25391 3075 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 FABP2P12104 132 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 PET117Q6UWS5 81 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 CHCHD1Q96BP2 118 aaKnown RBP11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 FMC1Q96HJ9 113 aa11.91□□□□□ -0.5
ATP2C1-214ENST00000508532 FAM27E3Q08E93 113 aa11.9□□□□□ -0.5
ATP2C1-214ENST00000508532 OCIAD2Q56VL3 154 aa11.9□□□□□ -0.5
ATP2C1-214ENST00000508532 SLC25A2Q9BXI2 301 aa11.9□□□□□ -0.5
ATP2C1-214ENST00000508532 IGKV3-15P01624 115 aa11.9□□□□□ -0.5
ATP2C1-214ENST00000508532 LOXL3P58215 753 aa11.9□□□□□ -0.5
ATP2C1-214ENST00000508532 TMEM97Q5BJF2 176 aa11.9□□□□□ -0.5
ATP2C1-214ENST00000508532 MDS2Q8NDY4 140 aa11.9□□□□□ -0.5
ATP2C1-214ENST00000508532 IGKV1OR2-108A0A075B7D4 117 aa11.9□□□□□ -0.5
ATP2C1-214ENST00000508532 ITGB1BP1O14713 200 aa11.9□□□□□ -0.5
ATP2C1-214ENST00000508532 SSBP2P81877 361 aaPredicted RBP11.9□□□□□ -0.5
ATP2C1-214ENST00000508532 ZNF414Q96IQ9 312 aa11.9□□□□□ -0.5
ATP2C1-214ENST00000508532 ONECUT1Q9UBC0 465 aa11.9□□□□□ -0.5
ATP2C1-214ENST00000508532 IGLC7A0M8Q6 106 aa11.89□□□□□ -0.51
ATP2C1-214ENST00000508532 NCBP2LA6PVI3 153 aaKnown RBP11.89□□□□□ -0.51
ATP2C1-214ENST00000508532 NDUFB8O95169 186 aa11.89□□□□□ -0.51
ATP2C1-214ENST00000508532 MC5RP33032 325 aa11.89□□□□□ -0.51
ATP2C1-214ENST00000508532 PSG9Q00887 426 aa11.89□□□□□ -0.51
ATP2C1-214ENST00000508532 C1orf162Q8NEQ5 155 aaPredicted RBP11.89□□□□□ -0.51
ATP2C1-214ENST00000508532 TTC28Q96AY4 2481 aa11.89□□□□□ -0.51
ATP2C1-214ENST00000508532 SMIM12Q96EX1 92 aa11.89□□□□□ -0.51
ATP2C1-214ENST00000508532 CACNG7P62955 275 aa11.89□□□□□ -0.51
ATP2C1-214ENST00000508532 UTF1Q5T230 341 aa11.89□□□□□ -0.51
ATP2C1-214ENST00000508532 COL25A1Q9BXS0 654 aaPredicted RBP11.89□□□□□ -0.51
ATP2C1-214ENST00000508532 SOX21Q9Y651 276 aaPredicted RBP11.89□□□□□ -0.51
ATP2C1-214ENST00000508532 IGHV1-24A0A0C4DH33 117 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms