RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 J3QRK9 145 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 IFNA1P01562 189 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 SMIM17P0DL12 118 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 ATP5G3P48201 142 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 DEFA3P59666 94 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 Q6Q795 121 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 ZNF826PQ6ZT77 177 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 BPIFA4PQ86YQ2 179 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 TERB2Q8NHR7 220 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 PFN4Q8NHR9 129 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 SLC25A40Q8TBP6 338 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 FAM172AQ8WUF8 416 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 C2orf50Q96LR7 162 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 GINS3Q9BRX5 216 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 TVP23BQ9NYZ1 205 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 ERGIC3Q9Y282 383 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 V9GYQ6 96 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 ANKRD31Q8N7Z5 1873 aa0.84□□□□□ -2.28
TOPBP1-204ENST00000505804 ARHGEF28Q8N1W1 1705 aaKnown RBP0.84□□□□□ -2.28
TOPBP1-204ENST00000505804 RIC1Q4ADV7 1423 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 NUP98P52948 1817 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 TRBV19A0A075B6N1 114 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 CLDN25C9JDP6 229 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 G3V2T6 193 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 PGRMC1O00264 195 aaKnown RBP0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 FABP1P07148 127 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 CTSDP07339 412 aaPredicted RBP0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 HTR1AP08908 422 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 OR4E1P0C645 316 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 CRYGAP11844 174 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 SPI1P17947 270 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 S100A4P26447 101 aaKnown RBP0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 CASP1P29466 404 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 SRIP30626 198 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 CRYBA4P53673 196 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 PIGPP57054 158 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 TAS2R41P59536 307 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 NCALDP61601 193 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 RHOBP62745 196 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 GNG3P63215 75 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 LINC01554Q52M75 96 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 TRIQKQ629K1 86 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 MIR17HGQ75NE6 70 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 CLVS1Q8IUQ0 354 aaPredicted RBP0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 HIST3H2BBQ8N257 126 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 LINC00471Q8N535 108 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 SMIM20Q8N5G0 67 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 SIGLECL1Q8N7X8 197 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 OR52R1Q8NGF1 315 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 OR13C6PQ8NH95 151 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 DNAJC9Q8WXX5 260 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 GINS4Q9BRT9 223 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 SLC50A1Q9BRV3 221 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 SLC39A9Q9NUM3 307 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 SS18L2Q9UHA2 77 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 UTP11Q9Y3A2 253 aaKnown RBP0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 PIK3C2AO00443 1686 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 RYR1P21817 5038 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 DOCK4Q8N1I0 1966 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 MAST4O15021 2626 aa0.83□□□□□ -2.28
TOPBP1-204ENST00000505804 NCAPD3P42695 1498 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 FLNBO75369 2602 aaKnown RBP0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 PCNTO95613 3336 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 IGKV1-9A0A0C4DH69 117 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 C1orf196B1AJZ1 125 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 C19orf84I3L1E1 186 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 CYB5BO43169 146 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 MFSD11O43934 449 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 IFNA7P01567 189 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 YPEL3P61236 119 aaPredicted RBP0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 GNG5P63218 68 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 RHEBQ15382 184 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 LYRM7Q5U5X0 104 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 LCA10Q71F78 164 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 TRAPPC6BQ86SZ2 158 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 OR4D11Q8NGI4 311 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 ANP32BQ92688 251 aaKnown RBP0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 PCBD2Q9H0N5 130 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 TMEM133Q9H2Q1 129 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 BOLA2Q9H3K6 86 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 LYRM2Q9NU23 88 aaPredicted RBP0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 MED29Q9NX70 200 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 PRNDQ9UKY0 176 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 UFC1Q9Y3C8 167 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 TAF1LQ8IZX4 1826 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 NCOA6Q14686 2063 aaPredicted RBP0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 RIMBP3CA6NJZ7 1639 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 RIMBP3BA6NNM3 1639 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 RIMBP3Q9UFD9 1639 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 SZT2Q5T011 3432 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 FBN2P35556 2912 aa0.82□□□□□ -2.28
TOPBP1-204ENST00000505804 DNHD1Q96M86 4753 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 UHRF1BP1Q6BDS2 1440 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 YTHDC2Q9H6S0 1430 aaKnown RBP0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 BPTFQ12830 3046 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 EML6Q6ZMW3 1958 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 GPR98Q8WXG9 6306 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 VIRMAQ69YN4 1812 aaKnown RBP0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 A0A087X0T9 212 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 PPP5D1E7EU14 171 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms