RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	OR5AU1	Q8NGC0	362 aa		9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	OR4F5	Q8NH21	305 aa		9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	RPRM	Q9NS64	109 aa		9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	GAR1	Q9NY12	217 aa	Known RBP	9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	CLPSL1	A2RUU4	121 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	OR2T8	A6NH00	312 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	TRBV12-3	P01733	135 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	CLEC3B	P05452	202 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	NMB	P08949	121 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	PSG1	P11464	419 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	M6PR	P20645	277 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	RAB2A	P61019	212 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	TMEM41B	Q5BJD5	291 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	GCSAML	Q5JQS6	135 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	FAM209B	Q5JX69	171 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	SPSB3	Q6PJ21	355 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	CLEC19A	Q6UXS0	136 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	RNF141	Q8WVD5	230 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	WFDC12	Q8WWY7	111 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	UBE2E2	Q96LR5	201 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	GNB4	Q9HAV0	340 aa		9.37	□□□□□ -0.91
MATR3-231	ENST00000502394	WI2-2373I1.2	A0A1W2PRP0	233 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	SEC14L6	B5MCN3	397 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	OR2C1	O95371	312 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	IGHV3-11	P01762	117 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	MB	P02144	154 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	FHIT	P49789	147 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	ELL	P55199	621 aa	Predicted RBP	9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	ZNF616	Q08AN1	781 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	ZNF726P1	Q15940	193 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	CLLU1	Q5K131	121 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	AKR1C8P	Q5T2L2	129 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	PATE2	Q6UY27	113 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	DPPA3	Q6W0C5	159 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	RPP25L	Q8N5L8	163 aa	Known RBP	9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	OR4X2	Q8NGF9	303 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	LRRC20	Q8TCA0	184 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	SAT2	Q96F10	170 aa	Predicted RBP	9.36	□□□□□ -0.91
MATR3-231	ENST00000502394	RNF114	Q9Y508	228 aa		9.36	□□□□□ -0.91
MATR3-231	ENST00000502394		A0A1B0GUS0	222 aa		9.35	□□□□□ -0.91
MATR3-231	ENST00000502394		I3L521	148 aa		9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	BMPR1B	O00238	502 aa		9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	NUPL2	O15504	423 aa	Known RBP	9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	FABP1	P07148	127 aa		9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	LGALS1	P09382	135 aa	Known RBP	9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	OR5G3	P0C626	314 aa		9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	RD3L	P0DJH9	198 aa		9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	CDX1	P47902	265 aa	Predicted RBP	9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	ACOT6	Q3I5F7	207 aa	Predicted RBP	9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	PXDC1	Q5TGL8	231 aa		9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	ZNF600	Q6ZNG1	722 aa		9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	SSX7	Q7RTT5	188 aa		9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	OR51G1	Q8NGK1	321 aa		9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	LYPD6B	Q8NI32	183 aa		9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	TMEM37	Q8WXS4	190 aa		9.35	□□□□□ -0.91
MATR3-231	ENST00000502394	PPP5D1	E7EU14	171 aa		9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	SCGB2A1	O75556	95 aa		9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	ARL3	P36405	182 aa		9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	OR10G4	Q8NGN3	311 aa		9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	OR10G9	Q8NGN4	311 aa		9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	OR10G7	Q8NGN6	311 aa		9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	GATAD1	Q8WUU5	269 aa		9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	PCNP	Q8WW12	178 aa	Known RBP	9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	MBD3L1	Q8WWY6	194 aa		9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	RCC1L	Q96I51	464 aa	Known RBP	9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	C19orf24	Q9BVV8	132 aa		9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	MRPL27	Q9P0M9	148 aa	Known RBP	9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	PEF1	Q9UBV8	284 aa	Known RBP	9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	JMJD1C	Q15652	2540 aa		9.34	□□□□□ -0.91
MATR3-231	ENST00000502394	ZNF705E	A8MWA4	302 aa	Predicted RBP	9.33	□□□□□ -0.92
MATR3-231	ENST00000502394	CD28	P10747	220 aa		9.33	□□□□□ -0.92
MATR3-231	ENST00000502394	KRTAP10-3	P60369	221 aa		9.33	□□□□□ -0.92
MATR3-231	ENST00000502394	BLOC1S1	P78537	153 aa		9.33	□□□□□ -0.92
MATR3-231	ENST00000502394	USF2	Q15853	346 aa	Predicted RBP	9.33	□□□□□ -0.92
MATR3-231	ENST00000502394	SPATA31B1P	Q5VZV4	182 aa		9.33	□□□□□ -0.92
MATR3-231	ENST00000502394	TOMM20L	Q6UXN7	152 aa		9.33	□□□□□ -0.92
MATR3-231	ENST00000502394		Q6ZRG5	221 aa		9.33	□□□□□ -0.92
MATR3-231	ENST00000502394	C18orf65	Q6ZTR6	163 aa		9.33	□□□□□ -0.92
MATR3-231	ENST00000502394	OR1L4	Q8NGR5	311 aa		9.33	□□□□□ -0.92
MATR3-231	ENST00000502394	FAM213B	Q8TBF2	198 aa		9.33	□□□□□ -0.92
MATR3-231	ENST00000502394		Q8WTZ3	238 aa		9.33	□□□□□ -0.92
MATR3-231	ENST00000502394	C4orf3	Q8WVX3	66 aa		9.33	□□□□□ -0.92
MATR3-231	ENST00000502394	RNF125	Q96EQ8	232 aa		9.33	□□□□□ -0.92
MATR3-231	ENST00000502394	PUS1	Q9Y606	427 aa	Known RBP eCLIP	9.33	□□□□□ -0.92
MATR3-231	ENST00000502394	TRAV1-1	A0A0B4J248	108 aa		9.32	□□□□□ -0.92
MATR3-231	ENST00000502394	CTXND1	A0A1B0GTU2	59 aa		9.32	□□□□□ -0.92
MATR3-231	ENST00000502394	ANKRD34B	A5PLL1	514 aa		9.32	□□□□□ -0.92
MATR3-231	ENST00000502394	NDUFA4	O00483	81 aa		9.32	□□□□□ -0.92
MATR3-231	ENST00000502394	GGCT	O75223	188 aa	Known RBP	9.32	□□□□□ -0.92
MATR3-231	ENST00000502394	IL4	P05112	153 aa		9.32	□□□□□ -0.92
MATR3-231	ENST00000502394	CDC34	P49427	236 aa	Predicted RBP	9.32	□□□□□ -0.92
MATR3-231	ENST00000502394	LYZ	P61626	148 aa		9.32	□□□□□ -0.92
MATR3-231	ENST00000502394	REL	Q04864	619 aa	Predicted RBP	9.32	□□□□□ -0.92
MATR3-231	ENST00000502394	MORN5	Q5VZ52	161 aa		9.32	□□□□□ -0.92
MATR3-231	ENST00000502394	FAM122C	Q6P4D5	195 aa		9.32	□□□□□ -0.92
MATR3-231	ENST00000502394	PRIMA1	Q86XR5	153 aa		9.32	□□□□□ -0.92
MATR3-231	ENST00000502394	RAB24	Q969Q5	203 aa		9.32	□□□□□ -0.92
MATR3-231	ENST00000502394	OR5B12	Q96R08	314 aa		9.32	□□□□□ -0.92
MATR3-231	ENST00000502394	PFDN5	Q99471	154 aa		9.32	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms