RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 CCDC167Q9P0B6 97 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 MRPL27Q9P0M9 148 aaKnown RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 UQCR10Q9UDW1 63 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 ZNF230Q9UIE0 474 aaPredicted RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 ZNF391Q9UJN7 358 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 HHLA2Q9UM44 414 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 COQ4Q9Y3A0 265 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 MRPS16Q9Y3D3 137 aaKnown RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 RHBDD3Q9Y3P4 386 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 URGCP-MRPS24S4R325 110 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 CNTRLQ7Z7A1 2325 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 TRBV24-1A0A075B6N3 115 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 TRAV38-1A0A0B4J264 116 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 PIGBOS1A0A0B4J2F0 54 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 IGHV1-69-2A0A0G2JMI3 117 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 A0A0U1RQV1 116 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 ANKRD20A5PA0PJZ0 165 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 C7orf77A4D0Y5 90 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 A6NDN8 102 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 C17orf51A8MQB3 221 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 GABARAPH6UMI1 98 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 CLDN34H7C241 214 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 FXYD1O00168 92 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 MFSD11O43934 449 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 HSBP1O75506 76 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 ARL6IP5O75915 188 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 S1PR2O95136 353 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 NDUFB6O95139 128 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 FARS2O95363 451 aaKnown RBP1.46□□□□□ -2.18
CBX3-208ENST00000497498 HLA-DQA1P01909 254 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 HBZP02008 142 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 APOA2P02652 100 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 OPN1SWP03999 348 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 HLA-DQB2P05538 268 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 CD14P08571 375 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 OR4Q2P0C623 313 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 OR5G3P0C626 314 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 SFTA3P0C7M3 94 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 ZNF688P0C7X2 276 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 RD3LP0DJH9 198 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 OR13C7P0DN81 318 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 GZMBP10144 247 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 ESDP10768 282 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 HIST1H1DP16402 221 aaKnown RBP1.46□□□□□ -2.18
CBX3-208ENST00000497498 GPX2P18283 190 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 ATP6V0CP27449 155 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 GABRA3P34903 492 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 TGFBR1P36897 503 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 GUCA1AP43080 201 aaPredicted RBP1.46□□□□□ -2.18
CBX3-208ENST00000497498 PPICP45877 212 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 MARCKSL1P49006 195 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 DNASE1L1P49184 302 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 FABP6P51161 128 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 ZNF140P52738 457 aaPredicted RBP1.46□□□□□ -2.18
CBX3-208ENST00000497498 TPPP2P59282 170 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 TAS2R20P59543 309 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 CKS1BP61024 79 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 UBE2KP61086 200 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 MAXP61244 160 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 SNRPGP62308 76 aaKnown RBP1.46□□□□□ -2.18
CBX3-208ENST00000497498 LCN6P62502 163 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 RPS25P62851 125 aaKnown RBP1.46□□□□□ -2.18
CBX3-208ENST00000497498 PMVKQ15126 192 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 PMCHL1Q16048 86 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 PRSS8Q16651 343 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 LINC00303Q3SY05 128 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 ACSM3Q53FZ2 586 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 KHDC3LQ587J8 217 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 PSMG4Q5JS54 123 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 LDLRAD2Q5SZI1 272 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 FAM162BQ5T6X4 162 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 OR2T2Q6IF00 324 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 OPN5Q6U736 354 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 BRD3OSQ6XYD6 125 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 GLT6D1Q7Z4J2 308 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 ZNF664Q8N3J9 261 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 OR4S1Q8NGB4 309 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 OR51T1Q8NGJ9 327 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 OR4P4Q8NGL7 312 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 OR1P1Q8NH06 330 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 OR8S1Q8NH09 359 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 OR51Q1Q8NH59 317 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 RAB8BQ92930 207 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 RERGQ96A58 199 aaPredicted RBP1.46□□□□□ -2.18
CBX3-208ENST00000497498 PTH2Q96A98 100 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 FAM131CQ96AQ9 280 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 ZNF707Q96C28 371 aaPredicted RBP1.46□□□□□ -2.18
CBX3-208ENST00000497498 MS4A6EQ96DS6 147 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 CPB2Q96IY4 423 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 AP1S3Q96PC3 154 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 CIB3Q96Q77 187 aaPredicted RBP1.46□□□□□ -2.18
CBX3-208ENST00000497498 TSPAN32Q96QS1 320 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 GPR22Q99680 433 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 HIST1H2BLQ99880 126 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 PMCHL2Q9BQD1 86 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 HINT2Q9BX68 163 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 ULBP2Q9BZM5 246 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 TMEM126AQ9H061 195 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 SLC25A31Q9H0C2 315 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 SLC35B3Q9H1N7 401 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms