RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 ZNF705FA8MVS1 300 aaPredicted RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 B4DEV8 164 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 C8orf87E5RJ46 101 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 H3BQ15 152 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 PSPHP1O15172 72 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 EEF1E1O43324 174 aaKnown RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 UBL3O95164 117 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 EPPINO95925 133 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 IFNA1P01562 189 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 HLA-DQA1P01909 254 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 CTSDP07339 412 aaPredicted RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 CXCL1P09341 107 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 ZNF705DP0CH99 300 aaPredicted RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 ZNF705BP0CI00 300 aaPredicted RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 TPT1P13693 172 aaKnown RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 ZNF708P17019 499 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 OPRK1P41145 380 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 CCL23P55773 120 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 GNG3P63215 75 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 HIST1H3AP68431 136 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 BTN3A2P78410 334 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 CRADDP78560 199 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 DHRS2Q13268 280 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 C1DQ13901 141 aaKnown RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 ENDOGQ14249 297 aaKnown RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 BATFQ16520 125 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 IAH1Q2TAA2 248 aaPredicted RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 MPV17L2Q567V2 206 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 FAM162BQ5T6X4 162 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 PRR9Q5T870 116 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 AADACL3Q5VUY0 350 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 SPATA31B1PQ5VZV4 182 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 UNQ5815/PRO19632Q6UWF5 114 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 GKN2Q86XP6 184 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 OR8I2Q8N0Y5 310 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 MUC15Q8N387 334 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 TOMM5Q8N4H5 51 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 TMEM86BQ8N661 226 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 OR4X1Q8NH49 305 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 OR10D3Q8NH80 312 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 OR5AK2Q8NH90 309 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 MFSD8Q8NHS3 518 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 PSMF1Q92530 271 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 APOBEC3DQ96AK3 386 aaPredicted RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 MS4A6EQ96DS6 147 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 BTF3L4Q96K17 158 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 KCNS1Q96KK3 526 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 TSPAN32Q96QS1 320 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 TBX5Q99593 518 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 TBL1YQ9BQ87 522 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 SLC25A21Q9BQT8 299 aaPredicted RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 TMEM243Q9BU79 118 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 SFXN3Q9BWM7 321 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 ZNF471Q9BX82 626 aaPredicted RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 OR52D1Q9H346 318 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 BANF2Q9H503 90 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 MRPL16Q9NX20 251 aaKnown RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 ZNF586Q9NXT0 402 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 CCDC167Q9P0B6 97 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 SLC23A2Q9UGH3 650 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 NAT8BQ9UHF3 227 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 HSPB8Q9UJY1 196 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 TRAPPC2LQ9UL33 140 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 ARFGEF1Q9Y6D6 1849 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 NLRC5Q86WI3 1866 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 NUP214P35658 2090 aaPredicted RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 A0A0G2JMZ2 1700 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 LRRC37A2A6NM11 1700 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 LRRC37AA6NMS7 1700 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 STRCP1A6NGW2 1772 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 UBR2Q8IWV8 1755 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 CASP8AP2Q9UKL3 1982 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 SBF2Q86WG5 1849 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 PLXNA3P51805 1871 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 PLXNA4Q9HCM2 1894 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 PLXNA1Q9UIW2 1896 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 IGKV1-27A0A075B6S5 117 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 hCG_1818297A0A087WSY0 165 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 TRBV6-7A0A0A0MS04 114 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 IGHV6-1A0A0B4J1U7 121 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 IGHV2-26A0A0B4J1V2 119 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 IGHV1OR15-9A0A0B4J2B8 117 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 A0A0G2JMM0 328 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 A0A0U1RQV1 116 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 TEX50A0A1B0GTY4 177 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 A0A1W2PPB8 328 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 KIR3DP1A8MWS1 328 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 UMAD1C9J7I0 102 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 GABARAPH6UMI1 98 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 UPK2O00526 184 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 PIRO00625 290 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 BPY2O14599 106 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 TAX1BP3O14907 124 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 DEGS1O15121 323 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 GCM2O75603 506 aaPredicted RBP2.1□□□□□ -2.07
SSR1-209ENST00000488834 NDUFB6O95139 128 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 SOD1P00441 154 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 NRASP01111 189 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 MAS1P04201 325 aa2.1□□□□□ -2.07
SSR1-209ENST00000488834 CSN2P05814 226 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms